Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Gm22293-201ENSMUST00000083314 109 ntBASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Gm24928-201ENSMUST00000083399 107 ntBASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Gm25897-201ENSMUST00000083709 107 ntBASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trav6-3Q5R1E6 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm14517-201ENSMUST00000119040 337 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm14647-201ENSMUST00000119392 680 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm14238-201ENSMUST00000120227 323 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm6762-201ENSMUST00000121769 289 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm14713-201ENSMUST00000122362 686 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm24060-201ENSMUST00000157494 95 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm22059-201ENSMUST00000157544 104 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm17061-201ENSMUST00000163167 499 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm19203-201ENSMUST00000174049 939 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm20542-201ENSMUST00000174582 372 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Spin2g-201ENSMUST00000178425 687 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm28069-201ENSMUST00000189926 214 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm38149-201ENSMUST00000191943 339 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm18540-201ENSMUST00000204025 526 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm19709-201ENSMUST00000215403 482 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 AF357341-201ENSMUST00000083088 75 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav6-3Q5R1E6 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm24831-201ENSMUST00000116778 126 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm12515-201ENSMUST00000120116 361 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm15719-201ENSMUST00000120619 635 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm22789-201ENSMUST00000157884 130 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm23312-201ENSMUST00000158774 102 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm27796-201ENSMUST00000183863 261 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm27477-201ENSMUST00000184649 143 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm38231-201ENSMUST00000192030 347 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm37431-201ENSMUST00000195102 111 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm34091-201ENSMUST00000200875 604 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm17911-201ENSMUST00000210806 877 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm30674-201ENSMUST00000214523 392 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Olfr936-202ENSMUST00000216912 937 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm22979-201ENSMUST00000082609 159 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm23939-201ENSMUST00000082880 133 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm22739-201ENSMUST00000083437 160 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Gm10212-201ENSMUST00000087884 324 ntBASIC2.48□□□□□ -2.01
Trav6-3Q5R1E6 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms