Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm14537-201ENSMUST00000117464 599 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm15480-201ENSMUST00000120442 519 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm24060-201ENSMUST00000157494 95 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm22211-201ENSMUST00000158097 156 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm22395-201ENSMUST00000177427 96 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm7909-201ENSMUST00000182688 614 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm27611-201ENSMUST00000184690 108 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm28141-201ENSMUST00000186676 342 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm36934-201ENSMUST00000192007 306 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm19243-201ENSMUST00000198592 269 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm44076-201ENSMUST00000203072 520 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm10115-201ENSMUST00000076071 1228 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim40Q3UWA4 Mir294-201ENSMUST00000104710 84 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm24831-201ENSMUST00000116778 126 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm12016-201ENSMUST00000119079 681 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm25883-201ENSMUST00000157781 271 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Mir3112-201ENSMUST00000175431 82 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm18486-201ENSMUST00000184040 298 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm27817-201ENSMUST00000184302 233 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm43810-201ENSMUST00000201018 232 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm44099-201ENSMUST00000203299 112 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm25126-201ENSMUST00000083343 102 ntBASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim40Q3UWA4 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.28□□□□□ -1.89
Trim40Q3UWA4 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm23691-201ENSMUST00000101878 107 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Mir582-201ENSMUST00000103758 81 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm22657-201ENSMUST00000104197 132 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm25560-201ENSMUST00000104606 176 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm22194-201ENSMUST00000116869 95 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm11372-201ENSMUST00000117348 570 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm15176-201ENSMUST00000117734 135 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm15613-201ENSMUST00000118396 326 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm15025-201ENSMUST00000118434 418 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm14358-201ENSMUST00000118458 403 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm11869-201ENSMUST00000118701 329 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm13678-201ENSMUST00000118926 340 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm7219-201ENSMUST00000119619 297 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm13574-201ENSMUST00000120482 394 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm11506-201ENSMUST00000122414 470 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm6182-201ENSMUST00000156439 1208 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm22516-201ENSMUST00000158266 124 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm23312-201ENSMUST00000158774 102 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm7142-201ENSMUST00000194232 586 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm44475-201ENSMUST00000204041 424 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm43954-201ENSMUST00000204634 544 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.27□□□□□ -1.89
Trim40Q3UWA4 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.27□□□□□ -1.89
Trim40Q3UWA4 AC116589.9-201ENSMUST00000221462 908 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms