Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm42665-201ENSMUST00000202100 586 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm45063-201ENSMUST00000203726 472 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm44223-201ENSMUST00000204854 114 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm23460-201ENSMUST00000083258 109 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Upf3aQ3ULJ3 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm24914-201ENSMUST00000157285 313 ntBASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm25185-201ENSMUST00000157754 96 ntBASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm24958-201ENSMUST00000158009 97 ntBASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm24773-201ENSMUST00000158513 99 ntBASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm43478-201ENSMUST00000200381 292 ntBASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm22864-201ENSMUST00000083950 130 ntBASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.29□□□□□ -1.88
Upf3aQ3ULJ3 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm24273-201ENSMUST00000102332 164 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm11488-201ENSMUST00000117277 863 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm14591-201ENSMUST00000120407 518 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm26041-201ENSMUST00000158148 108 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm20651-201ENSMUST00000177219 329 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm27532-201ENSMUST00000183726 113 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm18748-201ENSMUST00000198507 622 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm18602-201ENSMUST00000209794 851 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm18242-201ENSMUST00000218455 542 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm22154-201ENSMUST00000083844 131 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Upf3aQ3ULJ3 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
Upf3aQ3ULJ3 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
Upf3aQ3ULJ3 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Gm12106-201ENSMUST00000116006 1200 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Gm12793-201ENSMUST00000119268 292 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Gm11321-201ENSMUST00000121257 902 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Gm23505-201ENSMUST00000158989 130 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Gm27308-201ENSMUST00000184807 233 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Gm44088-201ENSMUST00000204595 237 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Gm6112-201ENSMUST00000208037 629 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Gm45814-201ENSMUST00000212646 775 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Gm5176-202ENSMUST00000220267 583 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Upf3aQ3ULJ3 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Upf3aQ3ULJ3 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms