Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm42924-201ENSMUST00000197261 185 ntBASIC5.03□□□□□ -1.6
Rnf180Q3U827 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC5.03□□□□□ -1.6
Rnf180Q3U827 Gm8041-201ENSMUST00000199755 616 ntBASIC5.03□□□□□ -1.6
Rnf180Q3U827 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf180Q3U827 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC5.03□□□□□ -1.6
Rnf180Q3U827 Gm6462-201ENSMUST00000081488 304 ntBASIC5.03□□□□□ -1.6
Rnf180Q3U827 Mir181a-1-201ENSMUST00000083631 87 ntBASIC5.03□□□□□ -1.6
Rnf180Q3U827 Gm25859-201ENSMUST00000083710 91 ntBASIC5.03□□□□□ -1.6
Rnf180Q3U827 Olfr895-201ENSMUST00000093864 951 ntBASIC5.03□□□□□ -1.6
Rnf180Q3U827 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf180Q3U827 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
Rnf180Q3U827 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf180Q3U827 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf180Q3U827 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf180Q3U827 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf180Q3U827 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf180Q3U827 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rnf180Q3U827 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Rnf180Q3U827 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.03□□□□□ -1.6
Rnf180Q3U827 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf180Q3U827 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm15267-201ENSMUST00000120888 464 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm22314-201ENSMUST00000158007 281 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm28781-201ENSMUST00000185760 696 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm28339-201ENSMUST00000185845 696 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm29574-201ENSMUST00000186226 696 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm28828-201ENSMUST00000186601 696 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm29307-201ENSMUST00000187367 696 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm29335-201ENSMUST00000188361 459 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm28896-201ENSMUST00000188609 696 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm29339-201ENSMUST00000189613 696 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm28159-201ENSMUST00000190296 696 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm29407-201ENSMUST00000191468 696 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm9227-201ENSMUST00000194733 566 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm38107-201ENSMUST00000194873 696 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm5552-201ENSMUST00000197149 515 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm43825-201ENSMUST00000199650 734 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm44099-201ENSMUST00000203299 112 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm36776-201ENSMUST00000207006 203 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm5917-201ENSMUST00000217638 721 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm10264-201ENSMUST00000220589 429 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 AC125379.1-201ENSMUST00000221928 111 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 AC153662.1-201ENSMUST00000222220 270 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 AC173481.1-201ENSMUST00000223351 270 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 AC150560.2-201ENSMUST00000227208 171 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.02□□□□□ -1.61
Rnf180Q3U827 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf180Q3U827 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rnf180Q3U827 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rnf180Q3U827 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm4736-201ENSMUST00000100870 380 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm14825-201ENSMUST00000113538 701 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm12564-201ENSMUST00000119860 321 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm14815-201ENSMUST00000120060 488 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm14392-201ENSMUST00000120332 401 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm15177-201ENSMUST00000120491 577 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm13557-201ENSMUST00000120771 382 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm5391-201ENSMUST00000121155 613 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 n-R5s179-201ENSMUST00000122564 118 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm23435-201ENSMUST00000157183 156 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm25706-201ENSMUST00000157828 247 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm25434-201ENSMUST00000158278 167 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm25490-201ENSMUST00000158734 130 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm23028-201ENSMUST00000158773 265 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm16318-201ENSMUST00000162402 601 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm20462-201ENSMUST00000172623 408 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm19932-201ENSMUST00000177033 313 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Mir6938-201ENSMUST00000184173 63 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm18177-201ENSMUST00000188373 404 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm44820-201ENSMUST00000207420 396 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm8423-201ENSMUST00000211387 607 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm18488-201ENSMUST00000215082 364 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm22977-201ENSMUST00000082615 107 ntBASIC5.01□□□□□ -1.61
Rnf180Q3U827 Gm23503-201ENSMUST00000083903 107 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms