Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm37718-201ENSMUST00000191655 2631 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm24792-201ENSMUST00000104286 128 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm25111-201ENSMUST00000116686 147 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm11386-201ENSMUST00000117761 347 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm14901-201ENSMUST00000119001 283 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm14159-201ENSMUST00000119832 451 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm14875-201ENSMUST00000120881 319 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm11438-201ENSMUST00000121582 189 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm22480-201ENSMUST00000122568 128 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm25970-201ENSMUST00000157165 86 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm24418-201ENSMUST00000177597 79 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm24639-201ENSMUST00000178518 79 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm23076-201ENSMUST00000179082 79 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm25077-201ENSMUST00000179157 79 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm27190-201ENSMUST00000184890 542 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Trbv8-201ENSMUST00000194020 285 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm5983-201ENSMUST00000197739 770 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm3690-201ENSMUST00000211341 262 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm2628-201ENSMUST00000218019 426 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm7530-201ENSMUST00000218466 605 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 AC154467.1-201ENSMUST00000227527 449 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 AC163646.2-201ENSMUST00000227962 141 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.92□□□□□ -1.78
Col28a1Q2UY11 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm25943-201ENSMUST00000103791 90 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Mir466b-7-201ENSMUST00000103804 88 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Mir466b-5-201ENSMUST00000103900 88 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm14534-201ENSMUST00000120045 357 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm2768-201ENSMUST00000121062 250 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm13368-201ENSMUST00000122443 430 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm10444-201ENSMUST00000126708 148 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm22816-201ENSMUST00000157450 117 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm22314-201ENSMUST00000158007 281 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm17421-201ENSMUST00000167845 674 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Mir466b-4-201ENSMUST00000178801 90 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm25285-201ENSMUST00000178951 90 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Mir466b-6-201ENSMUST00000180061 90 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Mir466c-2-201ENSMUST00000180211 90 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm27899-201ENSMUST00000184715 64 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm17946-201ENSMUST00000186856 538 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm37837-201ENSMUST00000191743 604 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm38270-201ENSMUST00000192721 407 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm38088-201ENSMUST00000195829 241 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Mir6375-201ENSMUST00000197176 95 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Mir142-201ENSMUST00000198092 64 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm43825-201ENSMUST00000199650 734 ntBASIC3.91□□□□□ -1.78
Col28a1Q2UY11 Gm45063-201ENSMUST00000203726 472 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms