Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a1Q04857 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm4734-201ENSMUST00000200117 777 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a1Q04857 AC157570.3-201ENSMUST00000219281 205 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm9309-201ENSMUST00000223537 546 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 AC154358.1-201ENSMUST00000224871 218 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 AC158982.2-201ENSMUST00000226283 184 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm23460-201ENSMUST00000083258 109 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a1Q04857 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a1Q04857 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a1Q04857 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a1Q04857 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Col6a1Q04857 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a1Q04857 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Col6a1Q04857 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm24889-201ENSMUST00000104388 132 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm6956-201ENSMUST00000134724 546 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm23167-201ENSMUST00000157155 103 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm25907-201ENSMUST00000158486 125 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm16569-201ENSMUST00000160526 314 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm23660-201ENSMUST00000178362 79 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm24088-201ENSMUST00000179100 79 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm28717-201ENSMUST00000189950 315 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm28389-201ENSMUST00000190090 697 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Ighv2-8-201ENSMUST00000193935 262 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm42566-201ENSMUST00000197120 643 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm43739-201ENSMUST00000198294 307 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Mir7227-201ENSMUST00000200408 59 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm29793-201ENSMUST00000202874 460 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm45007-201ENSMUST00000206237 366 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm17989-201ENSMUST00000211543 412 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col6a1Q04857 AC163033.1-201ENSMUST00000218608 157 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a1Q04857 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a1Q04857 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.26□□□□□ -1.57
Col6a1Q04857 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a1Q04857 AC102369.2-201ENSMUST00000219725 1679 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a1Q04857 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a1Q04857 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a1Q04857 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm13880-201ENSMUST00000118421 474 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm12852-201ENSMUST00000119478 719 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm14775-201ENSMUST00000122089 310 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm22343-201ENSMUST00000122648 286 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm26102-201ENSMUST00000157251 284 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm24965-201ENSMUST00000157922 106 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm17954-201ENSMUST00000195893 607 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm18011-201ENSMUST00000203717 565 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm44765-201ENSMUST00000206927 601 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm6012-201ENSMUST00000210821 730 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm25818-201ENSMUST00000083282 164 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm25937-201ENSMUST00000083912 107 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a1Q04857 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a1Q04857 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.25□□□□□ -1.57
Col6a1Q04857 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Col6a1Q04857 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Col6a1Q04857 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Col6a1Q04857 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.24□□□□□ -1.57
Col6a1Q04857 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a1Q04857 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Col6a1Q04857 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms