Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.18□□□□□ -1.74
Col8a1Q00780 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col8a1Q00780 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col8a1Q00780 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col8a1Q00780 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col8a1Q00780 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col8a1Q00780 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col8a1Q00780 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm5757-201ENSMUST00000117494 528 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm12852-201ENSMUST00000119478 719 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm13518-201ENSMUST00000120018 233 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm12893-201ENSMUST00000121732 275 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm25341-201ENSMUST00000157461 268 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm25384-201ENSMUST00000157807 105 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm23411-201ENSMUST00000157988 62 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm4761-201ENSMUST00000178086 582 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm26828-201ENSMUST00000180640 172 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm27781-201ENSMUST00000185185 92 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm28744-201ENSMUST00000189939 340 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col8a1Q00780 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm19326-201ENSMUST00000219818 326 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm25260-201ENSMUST00000083053 134 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Mir193a-201ENSMUST00000083461 66 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col8a1Q00780 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.17□□□□□ -1.74
Col8a1Q00780 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col8a1Q00780 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col8a1Q00780 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Col8a1Q00780 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col8a1Q00780 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col8a1Q00780 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm38351-201ENSMUST00000195466 2518 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm22473-201ENSMUST00000104114 132 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm14915-201ENSMUST00000120747 204 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm15147-201ENSMUST00000122263 483 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm11506-201ENSMUST00000122414 470 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm25425-201ENSMUST00000157611 96 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm16569-201ENSMUST00000160526 314 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm9830-201ENSMUST00000178509 357 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Mir7022-201ENSMUST00000183749 61 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29512-201ENSMUST00000185544 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28110-201ENSMUST00000185782 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28838-201ENSMUST00000186338 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29057-201ENSMUST00000186468 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28660-201ENSMUST00000186496 253 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29661-201ENSMUST00000186781 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28737-201ENSMUST00000186808 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29118-201ENSMUST00000186908 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28433-201ENSMUST00000187085 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29635-201ENSMUST00000187221 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28759-201ENSMUST00000187621 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28831-201ENSMUST00000187739 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28200-201ENSMUST00000187778 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29026-201ENSMUST00000187787 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28752-201ENSMUST00000188340 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28797-201ENSMUST00000188543 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28855-201ENSMUST00000188680 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29378-201ENSMUST00000188723 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28569-201ENSMUST00000188748 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28120-201ENSMUST00000188812 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28369-201ENSMUST00000188993 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29037-201ENSMUST00000189092 313 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28909-201ENSMUST00000189406 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28705-201ENSMUST00000189548 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm28861-201ENSMUST00000189681 315 ntBASIC4.16□□□□□ -1.74
Col8a1Q00780 Gm29180-201ENSMUST00000190003 315 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms