Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.92□□□□□ -1.78
CiitaP79621 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CiitaP79621 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.92□□□□□ -1.78
CiitaP79621 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.92□□□□□ -1.78
CiitaP79621 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CiitaP79621 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CiitaP79621 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.92□□□□□ -1.78
CiitaP79621 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.92□□□□□ -1.78
CiitaP79621 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CiitaP79621 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CiitaP79621 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.92□□□□□ -1.78
CiitaP79621 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CiitaP79621 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.92□□□□□ -1.78
CiitaP79621 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
CiitaP79621 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CiitaP79621 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CiitaP79621 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CiitaP79621 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Gm25213-201ENSMUST00000102388 113 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Mir294-201ENSMUST00000104710 84 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CiitaP79621 Gm14358-201ENSMUST00000118458 403 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Gm12739-201ENSMUST00000119769 382 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Gm12693-201ENSMUST00000121965 483 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Gm23123-201ENSMUST00000157648 144 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Gm24241-201ENSMUST00000157787 145 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Gm24727-201ENSMUST00000158231 144 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CiitaP79621 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CiitaP79621 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.91□□□□□ -1.78
CiitaP79621 Zfp950-206ENSMUST00000178819 171 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Npn2-202ENSMUST00000189275 235 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.91□□□□□ -1.78
CiitaP79621 Gm37290-201ENSMUST00000195775 339 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CiitaP79621 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.91□□□□□ -1.78
CiitaP79621 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Gm45878-201ENSMUST00000211839 241 ntBASIC3.91□□□□□ -1.78
CiitaP79621 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Gm32300-201ENSMUST00000221735 515 ntBASIC3.91□□□□□ -1.78
CiitaP79621 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CiitaP79621 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.91□□□□□ -1.78
CiitaP79621 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CiitaP79621 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CiitaP79621 Gm24147-201ENSMUST00000082763 144 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Gm8074-201ENSMUST00000095071 252 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CiitaP79621 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CiitaP79621 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
CiitaP79621 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CiitaP79621 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CiitaP79621 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.91□□□□□ -1.78
CiitaP79621 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.91□□□□□ -1.78
CiitaP79621 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CiitaP79621 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CiitaP79621 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CiitaP79621 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CiitaP79621 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CiitaP79621 Mir1193-201ENSMUST00000116761 121 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm14669-201ENSMUST00000118841 250 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm11913-201ENSMUST00000119094 336 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm12137-201ENSMUST00000119565 346 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm9440-201ENSMUST00000119667 539 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm14008-201ENSMUST00000120483 274 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm15244-201ENSMUST00000121122 130 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm15147-201ENSMUST00000122263 483 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm23111-201ENSMUST00000122652 105 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.9□□□□□ -1.79
CiitaP79621 Gm23775-201ENSMUST00000158991 249 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm3221-201ENSMUST00000164869 440 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
CiitaP79621 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC3.9□□□□□ -1.79
CiitaP79621 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CiitaP79621 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CiitaP79621 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CiitaP79621 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.9□□□□□ -1.79
CiitaP79621 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CiitaP79621 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm43384-201ENSMUST00000200569 637 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.9□□□□□ -1.79
CiitaP79621 Gm44727-201ENSMUST00000204225 451 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.9□□□□□ -1.79
CiitaP79621 Gm45742-201ENSMUST00000212400 433 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.9□□□□□ -1.79
CiitaP79621 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CiitaP79621 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CiitaP79621 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CiitaP79621 Gm22304-201ENSMUST00000082688 129 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Gm24707-201ENSMUST00000082812 107 ntBASIC3.9□□□□□ -1.79
CiitaP79621 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.9□□□□□ -1.79
CiitaP79621 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms