Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28625-201ENSMUST00000188309 205 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.76□□□□□ -1.81
NcanP55066 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.76□□□□□ -1.81
NcanP55066 Gm37111-201ENSMUST00000193250 634 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.76□□□□□ -1.81
NcanP55066 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.76□□□□□ -1.81
NcanP55066 Gm43214-201ENSMUST00000199242 352 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.76□□□□□ -1.81
NcanP55066 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC3.76□□□□□ -1.81
NcanP55066 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.76□□□□□ -1.81
NcanP55066 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.76□□□□□ -1.81
NcanP55066 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.76□□□□□ -1.81
NcanP55066 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
NcanP55066 Snord35b-201ENSMUST00000082833 87 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm23455-201ENSMUST00000083331 100 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm22864-201ENSMUST00000083950 130 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm21286-201ENSMUST00000098035 545 ntBASIC3.76□□□□□ -1.81
NcanP55066 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
NcanP55066 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NcanP55066 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.76□□□□□ -1.81
NcanP55066 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.76□□□□□ -1.81
NcanP55066 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NcanP55066 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NcanP55066 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NcanP55066 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NcanP55066 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NcanP55066 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
NcanP55066 Gm14714-201ENSMUST00000119743 439 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm12873-201ENSMUST00000119988 422 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm14253-201ENSMUST00000122112 639 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm25270-201ENSMUST00000122606 138 ntBASIC3.75□□□□□ -1.81
NcanP55066 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NcanP55066 Gm24537-201ENSMUST00000157950 102 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm26028-201ENSMUST00000158660 294 ntBASIC3.75□□□□□ -1.81
NcanP55066 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NcanP55066 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.75□□□□□ -1.81
NcanP55066 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.75□□□□□ -1.81
NcanP55066 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.75□□□□□ -1.81
NcanP55066 Gm18327-201ENSMUST00000202426 830 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm44371-201ENSMUST00000204148 467 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm19366-201ENSMUST00000206996 156 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm45636-201ENSMUST00000210497 1064 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm29884-201ENSMUST00000218403 453 ntBASIC3.75□□□□□ -1.81
NcanP55066 AC159297.2-201ENSMUST00000219567 1075 ntBASIC3.75□□□□□ -1.81
NcanP55066 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm9845-201ENSMUST00000056409 598 ntBASIC3.75□□□□□ -1.81
NcanP55066 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC3.75□□□□□ -1.81
NcanP55066 Gm26129-201ENSMUST00000082719 107 ntBASIC3.75□□□□□ -1.81
NcanP55066 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NcanP55066 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm20679-201ENSMUST00000177285 1402 ntBASIC3.75□□□□□ -1.81
NcanP55066 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.75□□□□□ -1.81
NcanP55066 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
NcanP55066 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NcanP55066 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NcanP55066 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.74□□□□□ -1.81
NcanP55066 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
NcanP55066 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm13379-201ENSMUST00000118053 621 ntBASIC3.74□□□□□ -1.81
NcanP55066 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm14795-201ENSMUST00000118461 471 ntBASIC3.74□□□□□ -1.81
NcanP55066 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm15936-201ENSMUST00000118706 460 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm13678-201ENSMUST00000118926 340 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm6565-201ENSMUST00000121217 438 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm14402-201ENSMUST00000122217 508 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.74□□□□□ -1.81
NcanP55066 Gm23775-201ENSMUST00000158991 249 ntBASIC3.74□□□□□ -1.81
NcanP55066 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.74□□□□□ -1.81
NcanP55066 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm29563-201ENSMUST00000187249 496 ntBASIC3.74□□□□□ -1.81
NcanP55066 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NcanP55066 Gm38041-201ENSMUST00000194445 661 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NcanP55066 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NcanP55066 Gm34701-202ENSMUST00000204685 360 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm18410-201ENSMUST00000207199 577 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm18268-201ENSMUST00000208445 943 ntBASIC3.74□□□□□ -1.81
NcanP55066 Gm3690-201ENSMUST00000211341 262 ntBASIC3.74□□□□□ -1.81
NcanP55066 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms