Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Sox3P53784 BC051076-202ENSMUST00000199477 2868 ntBASIC3.22□□□□□ -1.89
Sox3P53784 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Sox3P53784 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Sox3P53784 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Sox3P53784 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Sox3P53784 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Sox3P53784 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.21□□□□□ -1.9
Sox3P53784 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Gm14879-201ENSMUST00000117308 507 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Gm9119-201ENSMUST00000118866 495 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Gm12372-201ENSMUST00000121654 768 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Sox3P53784 Gm26171-201ENSMUST00000158422 131 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Gm18397-201ENSMUST00000176704 587 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.21□□□□□ -1.9
Sox3P53784 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Sox3P53784 Gm26933-201ENSMUST00000182320 827 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Mir6401-201ENSMUST00000184499 109 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.21□□□□□ -1.9
Sox3P53784 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Sox3P53784 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Sox3P53784 Gm37989-201ENSMUST00000195202 803 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Gm5983-201ENSMUST00000197739 770 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Gm43415-201ENSMUST00000201934 750 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.21□□□□□ -1.9
Sox3P53784 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.21□□□□□ -1.9
Sox3P53784 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.21□□□□□ -1.9
Sox3P53784 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Sox3P53784 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Sox3P53784 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Sox3P53784 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.21□□□□□ -1.9
Sox3P53784 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.21□□□□□ -1.9
Sox3P53784 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Sox3P53784 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.21□□□□□ -1.9
Sox3P53784 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Sox3P53784 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sox3P53784 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Gm22674-201ENSMUST00000104413 131 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Gm12025-201ENSMUST00000117768 144 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Gm14681-201ENSMUST00000118047 411 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Gm14810-201ENSMUST00000121628 486 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Gm13676-201ENSMUST00000122185 591 ntBASIC3.2□□□□□ -1.9
Sox3P53784 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.2□□□□□ -1.9
Sox3P53784 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sox3P53784 Gm23167-201ENSMUST00000157155 103 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Sox3P53784 Gm23152-201ENSMUST00000175322 116 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sox3P53784 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.2□□□□□ -1.9
Sox3P53784 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Gm8747-201ENSMUST00000195392 751 ntBASIC3.2□□□□□ -1.9
Sox3P53784 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sox3P53784 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Gm44016-201ENSMUST00000203463 164 ntBASIC3.2□□□□□ -1.9
Sox3P53784 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.2□□□□□ -1.9
Sox3P53784 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.2□□□□□ -1.9
Sox3P53784 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.2□□□□□ -1.9
Sox3P53784 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Sox3P53784 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Sox3P53784 Gm23460-201ENSMUST00000083258 109 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Gm23104-201ENSMUST00000083722 104 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Gm22864-201ENSMUST00000083950 130 ntBASIC3.2□□□□□ -1.9
Sox3P53784 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sox3P53784 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Sox3P53784 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.2□□□□□ -1.9
Sox3P53784 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sox3P53784 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sox3P53784 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sox3P53784 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.19□□□□□ -1.9
Sox3P53784 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.19□□□□□ -1.9
Sox3P53784 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Sox3P53784 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Sox3P53784 Gm14517-201ENSMUST00000119040 337 ntBASIC3.19□□□□□ -1.9
Sox3P53784 Gm6591-201ENSMUST00000121063 434 ntBASIC3.19□□□□□ -1.9
Sox3P53784 Gm6762-201ENSMUST00000121769 289 ntBASIC3.19□□□□□ -1.9
Sox3P53784 Gm13868-201ENSMUST00000122411 294 ntBASIC3.19□□□□□ -1.9
Sox3P53784 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.19□□□□□ -1.9
Sox3P53784 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.19□□□□□ -1.9
Sox3P53784 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.19□□□□□ -1.9
Sox3P53784 Gm24289-201ENSMUST00000157629 135 ntBASIC3.19□□□□□ -1.9
Sox3P53784 Gm26215-201ENSMUST00000158584 139 ntBASIC3.19□□□□□ -1.9
Sox3P53784 Gm16236-201ENSMUST00000159588 379 ntBASIC3.19□□□□□ -1.9
Sox3P53784 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Sox3P53784 Gm27532-201ENSMUST00000183726 113 ntBASIC3.19□□□□□ -1.9
Sox3P53784 Gm27942-201ENSMUST00000184669 101 ntBASIC3.19□□□□□ -1.9
Sox3P53784 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sox3P53784 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.19□□□□□ -1.9
Sox3P53784 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.19□□□□□ -1.9
Sox3P53784 Gm37698-201ENSMUST00000192605 463 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms