Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm15480-201ENSMUST00000120442 519 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm13720-201ENSMUST00000120741 196 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm12770-201ENSMUST00000121734 462 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm23234-201ENSMUST00000157304 134 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm26393-201ENSMUST00000157625 129 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm27828-201ENSMUST00000184108 119 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm8676-201ENSMUST00000184206 637 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm27308-201ENSMUST00000184807 233 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm29045-201ENSMUST00000187278 698 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm38270-201ENSMUST00000192721 407 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm9722-201ENSMUST00000194568 802 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm17781-201ENSMUST00000195232 649 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm4248-201ENSMUST00000196905 316 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm42526-201ENSMUST00000198956 393 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm18100-201ENSMUST00000200897 452 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm43155-201ENSMUST00000202661 494 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm5358-201ENSMUST00000212814 353 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.16□□□□□ -1.9
Nkx2-1P50220 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm46146-201ENSMUST00000217483 346 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx2-1P50220 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx2-1P50220 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm25586-201ENSMUST00000082499 112 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Nkx2-1P50220 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.15□□□□□ -1.9
Nkx2-1P50220 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Nkx2-1P50220 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm14794-201ENSMUST00000118181 192 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm13082-201ENSMUST00000118877 561 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm14473-201ENSMUST00000122269 557 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm24014-201ENSMUST00000157728 157 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm26036-201ENSMUST00000158149 144 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm24930-201ENSMUST00000158315 83 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Spanxn4-201ENSMUST00000172433 424 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm20415-201ENSMUST00000172877 423 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm23152-201ENSMUST00000175322 116 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm26556-201ENSMUST00000180645 320 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm28623-201ENSMUST00000187219 192 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm37209-201ENSMUST00000194109 1276 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm5983-201ENSMUST00000197739 770 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm4045-201ENSMUST00000204076 310 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm44135-201ENSMUST00000205221 368 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm45742-201ENSMUST00000212400 433 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.15□□□□□ -1.91
Nkx2-1P50220 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx2-1P50220 Gm31849-201ENSMUST00000220306 375 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 AC122393.1-201ENSMUST00000226570 319 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Nkx2-1P50220 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Nkx2-1P50220 Mir30e-201ENSMUST00000083475 92 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.15□□□□□ -1.91
Nkx2-1P50220 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Nkx2-1P50220 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Nkx2-1P50220 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm24096-201ENSMUST00000103905 110 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm24469-201ENSMUST00000104487 131 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm23178-201ENSMUST00000116782 95 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm12149-201ENSMUST00000117511 654 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm13454-201ENSMUST00000118166 483 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm13640-201ENSMUST00000118445 264 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm11566-201ENSMUST00000118550 203 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm15231-201ENSMUST00000119174 447 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm11357-201ENSMUST00000119758 954 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm15038-201ENSMUST00000122144 296 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Mir1898-201ENSMUST00000122643 83 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm23887-201ENSMUST00000122683 172 ntBASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Nkx2-1P50220 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms