Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc3P49135 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc3P49135 Gm23518-201ENSMUST00000082835 153 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Mir323-201ENSMUST00000083683 86 ntBASIC4.51□□□□□ -1.69
Ercc3P49135 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Ercc3P49135 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc3P49135 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Ercc3P49135 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Ercc3P49135 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ercc3P49135 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Ercc3P49135 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Ercc3P49135 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ercc3P49135 Gm12102-201ENSMUST00000118251 604 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm11219-201ENSMUST00000118565 358 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm15312-201ENSMUST00000118827 271 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm12739-201ENSMUST00000119769 382 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm14008-201ENSMUST00000120483 274 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm15309-201ENSMUST00000121644 240 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm25748-201ENSMUST00000175487 70 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm27773-201ENSMUST00000184087 78 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Mir7047-201ENSMUST00000184595 64 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm17929-201ENSMUST00000186851 627 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.5□□□□□ -1.69
Ercc3P49135 Gm6240-201ENSMUST00000208014 473 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm18194-201ENSMUST00000210455 481 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 AC156795.1-201ENSMUST00000214655 414 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.5□□□□□ -1.69
Ercc3P49135 Gm18388-201ENSMUST00000222339 557 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 AC108945.1-201ENSMUST00000226477 94 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.5□□□□□ -1.69
Ercc3P49135 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Ercc3P49135 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ercc3P49135 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ercc3P49135 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ercc3P49135 Gm11429-201ENSMUST00000119089 144 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 Gm12137-201ENSMUST00000119565 346 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 Gm14739-201ENSMUST00000120424 802 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ercc3P49135 Gm23648-201ENSMUST00000180301 107 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.49□□□□□ -1.69
Ercc3P49135 Gm27580-201ENSMUST00000183666 149 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 Gm37603-201ENSMUST00000192368 219 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.49□□□□□ -1.69
Ercc3P49135 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 Gm5175-202ENSMUST00000219699 529 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC4.49□□□□□ -1.69
Ercc3P49135 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ercc3P49135 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Ercc3P49135 Gm23506-201ENSMUST00000083077 107 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 Olfr713-201ENSMUST00000098139 975 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Ercc3P49135 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ercc3P49135 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
Ercc3P49135 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ercc3P49135 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ercc3P49135 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Ercc3P49135 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC4.49□□□□□ -1.69
Ercc3P49135 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ercc3P49135 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Ercc3P49135 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.49□□□□□ -1.69
Ercc3P49135 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.49□□□□□ -1.69
Ercc3P49135 Gm42614-201ENSMUST00000198724 1554 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm45872-201ENSMUST00000209804 1584 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ercc3P49135 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ercc3P49135 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.48□□□□□ -1.69
Ercc3P49135 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm13831-201ENSMUST00000118764 302 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm13082-201ENSMUST00000118877 561 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm11943-201ENSMUST00000119473 327 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ercc3P49135 Gm14915-201ENSMUST00000120747 204 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm15799-201ENSMUST00000120899 289 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC4.48□□□□□ -1.69
Ercc3P49135 Gm26276-201ENSMUST00000157099 109 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm10357-201ENSMUST00000159886 264 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm25817-201ENSMUST00000177758 121 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm24766-201ENSMUST00000179182 121 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm27535-201ENSMUST00000183814 157 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm27189-201ENSMUST00000184119 190 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm28623-201ENSMUST00000187219 192 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ercc3P49135 Gm37946-201ENSMUST00000192064 347 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC4.48□□□□□ -1.69
Ercc3P49135 Gm38356-201ENSMUST00000194313 408 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm37732-201ENSMUST00000194377 316 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm34091-201ENSMUST00000200875 604 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm44135-201ENSMUST00000205221 368 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.48□□□□□ -1.69
Ercc3P49135 Gm7753-201ENSMUST00000221007 867 ntBASIC4.48□□□□□ -1.69
Ercc3P49135 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms