Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm22111-201ENSMUST00000178010 79 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm23687-201ENSMUST00000178664 79 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm24566-201ENSMUST00000179286 79 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm23305-201ENSMUST00000179342 79 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm26389-201ENSMUST00000179819 79 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm22130-201ENSMUST00000179979 79 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm22393-201ENSMUST00000180153 79 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm25085-201ENSMUST00000180298 79 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.13□□□□□ -1.91
Col2a1P28481 Gm33571-201ENSMUST00000193271 657 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col2a1P28481 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.13□□□□□ -1.91
Col2a1P28481 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Gm25799-201ENSMUST00000082643 107 ntBASIC3.13□□□□□ -1.91
Col2a1P28481 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col2a1P28481 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col2a1P28481 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col2a1P28481 Gm14885-201ENSMUST00000117969 496 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 Gm2288-201ENSMUST00000118560 638 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 Gm8260-201ENSMUST00000119230 353 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.12□□□□□ -1.91
Col2a1P28481 Gm22500-201ENSMUST00000158982 99 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col2a1P28481 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 Gm24561-201ENSMUST00000175182 95 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 Gm45452-201ENSMUST00000210905 177 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 Gm25005-201ENSMUST00000083812 156 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 Gm10343-201ENSMUST00000096279 348 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.12□□□□□ -1.91
Col2a1P28481 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.12□□□□□ -1.91
Col2a1P28481 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.12□□□□□ -1.91
Col2a1P28481 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col2a1P28481 Gm37311-201ENSMUST00000195541 2024 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col2a1P28481 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col2a1P28481 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col2a1P28481 Gm26247-201ENSMUST00000116702 91 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Gm13349-201ENSMUST00000118436 411 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Gm25839-201ENSMUST00000158921 103 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Atp2b4-208ENSMUST00000167348 243 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Col2a1P28481 Gm29513-201ENSMUST00000185741 202 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Gm44308-201ENSMUST00000197080 99 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Gm42976-201ENSMUST00000200313 222 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Gm18645-202ENSMUST00000212222 760 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC3.11□□□□□ -1.91
Col2a1P28481 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.11□□□□□ -1.91
Col2a1P28481 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col2a1P28481 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col2a1P28481 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Col2a1P28481 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col2a1P28481 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Col2a1P28481 Gm15733-201ENSMUST00000132957 242 ntBASIC3.1□□□□□ -1.91
Col2a1P28481 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.1□□□□□ -1.91
Col2a1P28481 Gm22330-201ENSMUST00000158068 115 ntBASIC3.1□□□□□ -1.91
Col2a1P28481 Gm24002-201ENSMUST00000158456 104 ntBASIC3.1□□□□□ -1.91
Col2a1P28481 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Col2a1P28481 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.1□□□□□ -1.91
Col2a1P28481 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.1□□□□□ -1.91
Col2a1P28481 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3.1□□□□□ -1.91
Col2a1P28481 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC3.1□□□□□ -1.91
Col2a1P28481 Gm37353-201ENSMUST00000194497 313 ntBASIC3.1□□□□□ -1.91
Col2a1P28481 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.1□□□□□ -1.91
Col2a1P28481 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
Col2a1P28481 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Col2a1P28481 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.1□□□□□ -1.91
Col2a1P28481 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col2a1P28481 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
Col2a1P28481 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col2a1P28481 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.1□□□□□ -1.91
Col2a1P28481 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col2a1P28481 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.1□□□□□ -1.91
Col2a1P28481 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Col2a1P28481 Gm24274-201ENSMUST00000116787 124 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Col2a1P28481 Gm23895-201ENSMUST00000158108 160 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Gm16111-201ENSMUST00000162128 285 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Col2a1P28481 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Col2a1P28481 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Col2a1P28481 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC3.09□□□□□ -1.91
Col2a1P28481 Gm28900-201ENSMUST00000185232 156 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Gm37599-201ENSMUST00000193067 489 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Col2a1P28481 Gm45071-201ENSMUST00000205353 571 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 Gm45252-201ENSMUST00000211579 397 ntBASIC3.09□□□□□ -1.91
Col2a1P28481 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms