Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC2.68□□□□□ -1.98
Sdc1P18828 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.68□□□□□ -1.98
Sdc1P18828 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC2.68□□□□□ -1.98
Sdc1P18828 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Sdc1P18828 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.68□□□□□ -1.98
Sdc1P18828 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Sdc1P18828 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Sdc1P18828 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Sdc1P18828 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Sdc1P18828 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Sdc1P18828 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.68□□□□□ -1.98
Sdc1P18828 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
Sdc1P18828 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Sdc1P18828 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm22194-201ENSMUST00000116869 95 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm15560-201ENSMUST00000117107 643 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm14753-201ENSMUST00000118503 246 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm16005-201ENSMUST00000120515 269 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC2.67□□□□□ -1.98
Sdc1P18828 Gm22225-201ENSMUST00000157358 278 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm22531-201ENSMUST00000158819 140 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.67□□□□□ -1.98
Sdc1P18828 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC2.67□□□□□ -1.98
Sdc1P18828 Mir6410-201ENSMUST00000184204 104 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm37281-201ENSMUST00000192412 439 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm8790-201ENSMUST00000194108 322 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.67□□□□□ -1.98
Sdc1P18828 Gm37836-201ENSMUST00000195875 175 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm44354-201ENSMUST00000196017 143 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm42828-201ENSMUST00000199669 469 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Gm44718-201ENSMUST00000206886 359 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Sdc1P18828 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Sdc1P18828 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Sdc1P18828 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Sdc1P18828 Gm22507-201ENSMUST00000082773 160 ntBASIC2.67□□□□□ -1.98
Sdc1P18828 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Sdc1P18828 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Sdc1P18828 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Sdc1P18828 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Sdc1P18828 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Sdc1P18828 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc1P18828 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc1P18828 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc1P18828 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc1P18828 Gm25726-201ENSMUST00000104529 129 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc1P18828 Gm14299-201ENSMUST00000117586 397 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.66□□□□□ -1.98
Sdc1P18828 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.66□□□□□ -1.98
Sdc1P18828 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC2.66□□□□□ -1.98
Sdc1P18828 Gm22961-201ENSMUST00000157964 106 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Gm17038-201ENSMUST00000166586 494 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Sdc1P18828 Gm20450-201ENSMUST00000173652 147 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.66□□□□□ -1.98
Sdc1P18828 Gm28010-201ENSMUST00000179485 126 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Gm27161-201ENSMUST00000183960 562 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Mir6383-201ENSMUST00000184545 116 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Gm27964-201ENSMUST00000185195 62 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc1P18828 Gm20776-201ENSMUST00000189940 700 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Gm37088-201ENSMUST00000193887 406 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.66□□□□□ -1.98
Sdc1P18828 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Gm46233-201ENSMUST00000217831 449 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.66□□□□□ -1.98
Sdc1P18828 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 AC154241.1-201ENSMUST00000223952 356 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc1P18828 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.66□□□□□ -1.98
Sdc1P18828 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc1P18828 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Sdc1P18828 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Sdc1P18828 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Sdc1P18828 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Sdc1P18828 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.66□□□□□ -1.98
Sdc1P18828 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Sdc1P18828 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Sdc1P18828 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Sdc1P18828 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
Sdc1P18828 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Sdc1P18828 Mir690-201ENSMUST00000102110 109 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Sdc1P18828 Gm7429-201ENSMUST00000118664 348 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm14566-201ENSMUST00000118915 321 ntBASIC2.65□□□□□ -1.99
Sdc1P18828 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms