Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC2.82□□□□□ -1.96
Cdx1P18111 AC133101.1-201ENSMUST00000226939 1199 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
Cdx1P18111 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm25481-201ENSMUST00000083221 158 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC2.82□□□□□ -1.96
Cdx1P18111 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm43486-201ENSMUST00000196431 4339 ntBASIC2.82□□□□□ -1.96
Cdx1P18111 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Cdx1P18111 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Cdx1P18111 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Cdx1P18111 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Cdx1P18111 Gm14677-201ENSMUST00000117866 486 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm15142-201ENSMUST00000121013 856 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm22839-201ENSMUST00000158436 304 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm22890-201ENSMUST00000158642 144 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Cdx1P18111 Gm22252-201ENSMUST00000179316 79 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Cdx1P18111 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.81□□□□□ -1.96
Cdx1P18111 Gm3454-201ENSMUST00000185571 412 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm29576-201ENSMUST00000188020 678 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC2.81□□□□□ -1.96
Cdx1P18111 Gm29330-201ENSMUST00000190032 699 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm28354-201ENSMUST00000190904 678 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm28098-201ENSMUST00000191361 699 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm37979-201ENSMUST00000193065 712 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC2.81□□□□□ -1.96
Cdx1P18111 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm43224-201ENSMUST00000201567 898 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm44425-201ENSMUST00000203739 429 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm8745-201ENSMUST00000207846 782 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm45245-201ENSMUST00000210082 376 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Gm6012-201ENSMUST00000210821 730 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Cdx1P18111 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC2.81□□□□□ -1.96
Cdx1P18111 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC2.81□□□□□ -1.96
Cdx1P18111 AC133654.1-201ENSMUST00000228411 672 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.81□□□□□ -1.96
Cdx1P18111 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Cdx1P18111 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Cdx1P18111 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Cdx1P18111 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Cdx1P18111 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.81□□□□□ -1.96
Cdx1P18111 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Cdx1P18111 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Cdx1P18111 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Cdx1P18111 Gm24120-201ENSMUST00000103978 129 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm25765-201ENSMUST00000104100 132 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm3940-201ENSMUST00000105087 432 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm9009-201ENSMUST00000117321 326 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm13852-201ENSMUST00000122350 242 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.8□□□□□ -1.96
Cdx1P18111 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.8□□□□□ -1.96
Cdx1P18111 Gm22219-201ENSMUST00000157562 319 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm20450-201ENSMUST00000173652 147 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC2.8□□□□□ -1.96
Cdx1P18111 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.8□□□□□ -1.96
Cdx1P18111 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Cdx1P18111 Gm28650-201ENSMUST00000188413 411 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm9696-202ENSMUST00000191541 830 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Cdx1P18111 Gm18433-202ENSMUST00000195682 196 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm43541-201ENSMUST00000197208 581 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Trdv3-201ENSMUST00000198551 309 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm44520-201ENSMUST00000205447 802 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.8□□□□□ -1.96
Cdx1P18111 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Cdx1P18111 Gm35857-201ENSMUST00000212739 178 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Olfr936-202ENSMUST00000216912 937 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC2.8□□□□□ -1.96
Cdx1P18111 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Cdx1P18111 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Cdx1P18111 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Cdx1P18111 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Cdx1P18111 Gm23736-201ENSMUST00000082553 75 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Gm25004-201ENSMUST00000083811 161 ntBASIC2.8□□□□□ -1.96
Cdx1P18111 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Cdx1P18111 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms