Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.35□□□□□ -1.55
Msx1P13297 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.35□□□□□ -1.55
Msx1P13297 Gm10064-201ENSMUST00000071235 399 ntBASIC5.35□□□□□ -1.55
Msx1P13297 Gm25078-201ENSMUST00000082530 107 ntBASIC5.35□□□□□ -1.55
Msx1P13297 Gm24705-201ENSMUST00000082808 107 ntBASIC5.35□□□□□ -1.55
Msx1P13297 Gm25204-201ENSMUST00000082843 106 ntBASIC5.35□□□□□ -1.55
Msx1P13297 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC5.35□□□□□ -1.55
Msx1P13297 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.35□□□□□ -1.55
Msx1P13297 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msx1P13297 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msx1P13297 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.35□□□□□ -1.55
Msx1P13297 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msx1P13297 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.35□□□□□ -1.55
Msx1P13297 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msx1P13297 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msx1P13297 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Msx1P13297 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Msx1P13297 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msx1P13297 Gm36989-201ENSMUST00000193225 2160 ntBASIC5.35□□□□□ -1.55
Msx1P13297 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Msx1P13297 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.35□□□□□ -1.55
Msx1P13297 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msx1P13297 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.35□□□□□ -1.55
Msx1P13297 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msx1P13297 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.34□□□□□ -1.55
Msx1P13297 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Msx1P13297 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Msx1P13297 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Msx1P13297 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Msx1P13297 Gm24671-201ENSMUST00000104159 158 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Gm12568-201ENSMUST00000117362 624 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Gm6884-201ENSMUST00000119318 615 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Gm12074-201ENSMUST00000120189 219 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Gm13557-201ENSMUST00000120771 382 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Gm25015-201ENSMUST00000158400 128 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC5.34□□□□□ -1.55
Msx1P13297 Gm27414-201ENSMUST00000185033 381 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Gm28385-201ENSMUST00000185671 292 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.34□□□□□ -1.55
Msx1P13297 Gm28429-201ENSMUST00000188521 363 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Gm44456-201ENSMUST00000196554 89 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Gm42643-201ENSMUST00000200504 279 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Gm7990-201ENSMUST00000212126 593 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC5.34□□□□□ -1.55
Msx1P13297 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC5.34□□□□□ -1.55
Msx1P13297 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC5.34□□□□□ -1.55
Msx1P13297 Gm23686-201ENSMUST00000083241 164 ntBASIC5.34□□□□□ -1.55
Msx1P13297 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Msx1P13297 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Msx1P13297 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
Msx1P13297 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.34□□□□□ -1.56
Msx1P13297 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
Msx1P13297 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Msx1P13297 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Msx1P13297 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msx1P13297 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Msx1P13297 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.33□□□□□ -1.56
Msx1P13297 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Msx1P13297 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Msx1P13297 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Msx1P13297 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msx1P13297 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msx1P13297 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msx1P13297 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Msx1P13297 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msx1P13297 Gm12797-201ENSMUST00000118645 273 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Gm6829-201ENSMUST00000119858 360 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.33□□□□□ -1.56
Msx1P13297 Gm11819-201ENSMUST00000122192 372 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Gm15905-201ENSMUST00000137042 298 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Gm24481-201ENSMUST00000157210 102 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Gm23219-201ENSMUST00000158123 87 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Gm20542-201ENSMUST00000174582 372 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Gm23002-201ENSMUST00000179221 107 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Mir6539-201ENSMUST00000183732 110 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Gm29489-201ENSMUST00000188934 324 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Gm6651-201ENSMUST00000189471 271 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Gm19243-201ENSMUST00000198592 269 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC5.33□□□□□ -1.56
Msx1P13297 Gm6796-201ENSMUST00000211919 243 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.33□□□□□ -1.56
Msx1P13297 Gm10916-201ENSMUST00000080330 483 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Mir10a-201ENSMUST00000083585 110 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Msx1P13297 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC5.33□□□□□ -1.56
Msx1P13297 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msx1P13297 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msx1P13297 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msx1P13297 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Msx1P13297 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Msx1P13297 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms