Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm5215-201ENSMUST00000054380 405 ntBASIC5.28□□□□□ -1.56
RaraP11416 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RaraP11416 Gm23302-201ENSMUST00000082710 100 ntBASIC5.28□□□□□ -1.56
RaraP11416 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
RaraP11416 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RaraP11416 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.28□□□□□ -1.56
RaraP11416 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RaraP11416 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RaraP11416 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RaraP11416 Gm15084-201ENSMUST00000178585 1502 ntBASIC5.28□□□□□ -1.56
RaraP11416 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RaraP11416 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RaraP11416 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RaraP11416 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RaraP11416 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RaraP11416 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RaraP11416 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RaraP11416 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.27□□□□□ -1.57
RaraP11416 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RaraP11416 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RaraP11416 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RaraP11416 Gm13488-201ENSMUST00000120419 179 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm12686-201ENSMUST00000120546 397 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm13007-201ENSMUST00000121866 365 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm24441-201ENSMUST00000157235 281 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm24858-201ENSMUST00000158058 323 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm24931-201ENSMUST00000158324 107 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm17183-201ENSMUST00000171170 493 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm22348-201ENSMUST00000178674 79 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm24968-201ENSMUST00000179817 107 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm27165-201ENSMUST00000183951 232 ntBASIC5.27□□□□□ -1.57
RaraP11416 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm29475-201ENSMUST00000190767 312 ntBASIC5.27□□□□□ -1.57
RaraP11416 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.27□□□□□ -1.57
RaraP11416 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC5.27□□□□□ -1.57
RaraP11416 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.27□□□□□ -1.57
RaraP11416 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm44485-201ENSMUST00000199569 137 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm19177-201ENSMUST00000204520 613 ntBASIC5.27□□□□□ -1.57
RaraP11416 AC158606.1-201ENSMUST00000220078 325 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm33654-201ENSMUST00000221704 215 ntBASIC5.27□□□□□ -1.57
RaraP11416 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RaraP11416 mt-Ti-201ENSMUST00000082393 69 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm25801-201ENSMUST00000082638 106 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm24316-201ENSMUST00000083041 107 ntBASIC5.27□□□□□ -1.57
RaraP11416 Gm25207-201ENSMUST00000093745 107 ntBASIC5.27□□□□□ -1.57
RaraP11416 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RaraP11416 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RaraP11416 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RaraP11416 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.27□□□□□ -1.57
RaraP11416 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RaraP11416 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RaraP11416 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RaraP11416 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.26□□□□□ -1.57
RaraP11416 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RaraP11416 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.26□□□□□ -1.57
RaraP11416 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC5.26□□□□□ -1.57
RaraP11416 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RaraP11416 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RaraP11416 Gm2066-201ENSMUST00000118046 389 ntBASIC5.26□□□□□ -1.57
RaraP11416 Gm15120-201ENSMUST00000120602 301 ntBASIC5.26□□□□□ -1.57
RaraP11416 Gm15212-201ENSMUST00000122403 466 ntBASIC5.26□□□□□ -1.57
RaraP11416 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.26□□□□□ -1.57
RaraP11416 Gm24402-201ENSMUST00000157873 91 ntBASIC5.26□□□□□ -1.57
RaraP11416 Gm22891-201ENSMUST00000158641 164 ntBASIC5.26□□□□□ -1.57
RaraP11416 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RaraP11416 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.26□□□□□ -1.57
RaraP11416 Gm29665-201ENSMUST00000191457 528 ntBASIC5.26□□□□□ -1.57
RaraP11416 Gm32175-201ENSMUST00000193641 346 ntBASIC5.26□□□□□ -1.57
RaraP11416 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.26□□□□□ -1.57
RaraP11416 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.26□□□□□ -1.57
RaraP11416 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC5.26□□□□□ -1.57
RaraP11416 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.26□□□□□ -1.57
RaraP11416 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.26□□□□□ -1.57
RaraP11416 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.26□□□□□ -1.57
RaraP11416 AC165157.3-201ENSMUST00000220815 103 ntBASIC5.26□□□□□ -1.57
RaraP11416 Gm9512-201ENSMUST00000223112 497 ntBASIC5.26□□□□□ -1.57
RaraP11416 Gm23721-201ENSMUST00000083005 107 ntBASIC5.26□□□□□ -1.57
RaraP11416 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RaraP11416 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.26□□□□□ -1.57
RaraP11416 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RaraP11416 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.26□□□□□ -1.57
RaraP11416 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RaraP11416 Gm381-201ENSMUST00000117443 2037 ntBASIC5.26□□□□□ -1.57
RaraP11416 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RaraP11416 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RaraP11416 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.26□□□□□ -1.57
RaraP11416 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RaraP11416 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RaraP11416 Gm37205-201ENSMUST00000194820 2736 ntBASIC5.25□□□□□ -1.57
RaraP11416 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RaraP11416 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.25□□□□□ -1.57
RaraP11416 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.25□□□□□ -1.57
RaraP11416 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RaraP11416 Gm25758-201ENSMUST00000103987 129 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm23274-201ENSMUST00000104056 130 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm12901-201ENSMUST00000118690 532 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms