Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Hoxd3P09027 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
Hoxd3P09027 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm9077-201ENSMUST00000210657 2298 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Mir466j-201ENSMUST00000116876 122 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm14537-201ENSMUST00000117464 599 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm15896-201ENSMUST00000118045 440 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm12901-201ENSMUST00000118690 532 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm11822-201ENSMUST00000119177 415 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm12413-201ENSMUST00000121508 312 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm24594-201ENSMUST00000122502 99 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm8980-201ENSMUST00000140232 2197 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm6265-201ENSMUST00000149263 231 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm29484-201ENSMUST00000186067 324 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm5110-201ENSMUST00000203122 1063 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 AC150901.1-201ENSMUST00000208407 145 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hoxd3P09027 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.42□□□□□ -1.7
Hoxd3P09027 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm9202-201ENSMUST00000223036 437 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 AC123665.4-201ENSMUST00000228790 249 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 n-R5s204-201ENSMUST00000082972 119 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm23795-201ENSMUST00000084006 137 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm38198-201ENSMUST00000191772 3581 ntBASIC4.42□□□□□ -1.7
Hoxd3P09027 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
Hoxd3P09027 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hoxd3P09027 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Hoxd3P09027 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
Hoxd3P09027 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm11065-201ENSMUST00000111462 228 ntBASIC4.41□□□□□ -1.7
Hoxd3P09027 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm22315-201ENSMUST00000158010 143 ntBASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm24131-201ENSMUST00000158539 107 ntBASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm26291-201ENSMUST00000158889 137 ntBASIC4.41□□□□□ -1.7
Hoxd3P09027 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm17187-201ENSMUST00000164622 410 ntBASIC4.41□□□□□ -1.7
Hoxd3P09027 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm27414-201ENSMUST00000185033 381 ntBASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm5735-201ENSMUST00000207053 167 ntBASIC4.41□□□□□ -1.7
Hoxd3P09027 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.41□□□□□ -1.7
Hoxd3P09027 CT010449.1-201ENSMUST00000220624 153 ntBASIC4.41□□□□□ -1.7
Hoxd3P09027 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hoxd3P09027 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms