Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm18193-201ENSMUST00000210017 772 ntBASIC2.54□□□□□ -2
Col5a1O88207 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.54□□□□□ -2
Col5a1O88207 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col5a1O88207 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.54□□□□□ -2
Col5a1O88207 AC154510.1-201ENSMUST00000223925 737 ntBASIC2.54□□□□□ -2
Col5a1O88207 AC154424.1-201ENSMUST00000225883 799 ntBASIC2.54□□□□□ -2
Col5a1O88207 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.54□□□□□ -2
Col5a1O88207 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Col5a1O88207 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col5a1O88207 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Col5a1O88207 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col5a1O88207 Gm15933-201ENSMUST00000117215 616 ntBASIC2.54□□□□□ -2
Col5a1O88207 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Col5a1O88207 Gm12878-201ENSMUST00000118744 332 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm11446-201ENSMUST00000121319 866 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm14840-201ENSMUST00000122135 594 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm15279-201ENSMUST00000155593 288 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm25332-201ENSMUST00000158038 105 ntBASIC2.54□□□□□ -2
Col5a1O88207 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC2.54□□□□□ -2
Col5a1O88207 Gm27535-201ENSMUST00000183814 157 ntBASIC2.54□□□□□ -2
Col5a1O88207 Mir3569-201ENSMUST00000185080 58 ntBASIC2.54□□□□□ -2
Col5a1O88207 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.54□□□□□ -2
Col5a1O88207 Gm20776-201ENSMUST00000189940 700 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm18747-201ENSMUST00000198129 648 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm43264-201ENSMUST00000202284 325 ntBASIC2.54□□□□□ -2
Col5a1O88207 AC122464.1-201ENSMUST00000202789 770 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm17838-201ENSMUST00000205872 876 ntBASIC2.54□□□□□ -2
Col5a1O88207 Gm44865-201ENSMUST00000207240 531 ntBASIC2.54□□□□□ -2
Col5a1O88207 AC154851.2-201ENSMUST00000222172 644 ntBASIC2.54□□□□□ -2
Col5a1O88207 AC132833.3-201ENSMUST00000227472 866 ntBASIC2.54□□□□□ -2
Col5a1O88207 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.54□□□□□ -2
Col5a1O88207 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.54□□□□□ -2
Col5a1O88207 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col5a1O88207 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col5a1O88207 Gm23063-201ENSMUST00000102350 93 ntBASIC2.53□□□□□ -2
Col5a1O88207 Gm24671-201ENSMUST00000104159 158 ntBASIC2.53□□□□□ -2
Col5a1O88207 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.53□□□□□ -2
Col5a1O88207 Gm12757-201ENSMUST00000119465 800 ntBASIC2.53□□□□□ -2
Col5a1O88207 Gm12105-201ENSMUST00000120846 779 ntBASIC2.53□□□□□ -2
Col5a1O88207 Gm13433-201ENSMUST00000121701 240 ntBASIC2.53□□□□□ -2
Col5a1O88207 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col5a1O88207 Gm24465-201ENSMUST00000178398 107 ntBASIC2.53□□□□□ -2
Col5a1O88207 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col5a1O88207 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col5a1O88207 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col5a1O88207 Gm28438-201ENSMUST00000188299 345 ntBASIC2.53□□□□□ -2
Col5a1O88207 Gm43765-201ENSMUST00000196303 893 ntBASIC2.53□□□□□ -2
Col5a1O88207 Trdv3-201ENSMUST00000198551 309 ntBASIC2.53□□□□□ -2
Col5a1O88207 Gm19269-201ENSMUST00000211401 804 ntBASIC2.53□□□□□ -2
Col5a1O88207 Gm6796-201ENSMUST00000211919 243 ntBASIC2.53□□□□□ -2
Col5a1O88207 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.53□□□□□ -2
Col5a1O88207 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.53□□□□□ -2
Col5a1O88207 AC133598.4-202ENSMUST00000225267 469 ntBASIC2.53□□□□□ -2
Col5a1O88207 Diaph3-206ENSMUST00000226745 713 ntBASIC2.53□□□□□ -2
Col5a1O88207 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col5a1O88207 Snora23-201ENSMUST00000082517 184 ntBASIC2.53□□□□□ -2
Col5a1O88207 Gm22971-201ENSMUST00000083305 97 ntBASIC2.53□□□□□ -2
Col5a1O88207 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.53□□□□□ -2
Col5a1O88207 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.53□□□□□ -2
Col5a1O88207 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
Col5a1O88207 Gm6325-201ENSMUST00000122015 3114 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Gm14448-201ENSMUST00000116383 210 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.52□□□□□ -2.01
Col5a1O88207 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col5a1O88207 Gm22264-201ENSMUST00000178200 107 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.52□□□□□ -2.01
Col5a1O88207 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.52□□□□□ -2.01
Col5a1O88207 Gm43531-201ENSMUST00000200676 1114 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Gm17893-201ENSMUST00000203017 770 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Gm44703-201ENSMUST00000205724 248 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col5a1O88207 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col5a1O88207 Mir365-2-201ENSMUST00000083555 112 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Gm23058-201ENSMUST00000093703 107 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Gm25099-201ENSMUST00000093716 116 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
Col5a1O88207 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Col5a1O88207 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col5a1O88207 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col5a1O88207 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col5a1O88207 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col5a1O88207 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col5a1O88207 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Gm15536-201ENSMUST00000121411 114 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Gm17937-201ENSMUST00000197908 742 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Gm44208-201ENSMUST00000205199 421 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC2.52□□□□□ -2.01
Col5a1O88207 AC124399.1-201ENSMUST00000218334 590 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Gm25636-201ENSMUST00000082666 133 ntBASIC2.52□□□□□ -2.01
Col5a1O88207 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Col5a1O88207 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.51□□□□□ -2.01
Col5a1O88207 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col5a1O88207 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.51□□□□□ -2.01
Col5a1O88207 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms