Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.77□□□□□ -1.97
Sdc4O35988 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Sdc4O35988 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.77□□□□□ -1.97
Sdc4O35988 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.77□□□□□ -1.97
Sdc4O35988 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Sdc4O35988 Gm8074-201ENSMUST00000095071 252 ntBASIC2.77□□□□□ -1.97
Sdc4O35988 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Sdc4O35988 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.77□□□□□ -1.97
Sdc4O35988 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Sdc4O35988 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
Sdc4O35988 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Sdc4O35988 Mir682-201ENSMUST00000102281 96 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Gm11221-201ENSMUST00000117230 597 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Gm13366-201ENSMUST00000122198 970 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.76□□□□□ -1.97
Sdc4O35988 Gm8502-201ENSMUST00000185708 901 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Gm21147-201ENSMUST00000186046 913 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Gm37431-201ENSMUST00000195102 111 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Gm42665-201ENSMUST00000202100 586 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Gm45344-201ENSMUST00000211610 341 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.76□□□□□ -1.97
Sdc4O35988 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Sdc4O35988 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Gm24919-201ENSMUST00000083020 106 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Sdc4O35988 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Sdc4O35988 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.76□□□□□ -1.97
Sdc4O35988 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Sdc4O35988 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Sdc4O35988 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.75□□□□□ -1.97
Sdc4O35988 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 Mir294-201ENSMUST00000104710 84 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Sdc4O35988 Gm24681-201ENSMUST00000158760 107 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 Mir6405-201ENSMUST00000184584 124 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Sdc4O35988 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Sdc4O35988 Gm37353-201ENSMUST00000194497 313 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 Gm43355-201ENSMUST00000196541 346 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 Gm44030-201ENSMUST00000204865 432 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 AC173345.3-201ENSMUST00000221245 1093 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC2.75□□□□□ -1.97
Sdc4O35988 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 Gm22622-201ENSMUST00000082870 129 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 Gm10343-201ENSMUST00000096279 348 ntBASIC2.75□□□□□ -1.97
Sdc4O35988 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Sdc4O35988 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Sdc4O35988 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.74□□□□□ -1.97
Sdc4O35988 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Sdc4O35988 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Sdc4O35988 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Sdc4O35988 Gm22782-201ENSMUST00000104082 132 ntBASIC2.74□□□□□ -1.97
Sdc4O35988 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Sdc4O35988 Gm14562-201ENSMUST00000129885 543 ntBASIC2.74□□□□□ -1.97
Sdc4O35988 Snord53-201ENSMUST00000175146 78 ntBASIC2.74□□□□□ -1.97
Sdc4O35988 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.74□□□□□ -1.97
Sdc4O35988 Gm38283-201ENSMUST00000193041 695 ntBASIC2.74□□□□□ -1.97
Sdc4O35988 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.74□□□□□ -1.97
Sdc4O35988 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.74□□□□□ -1.97
Sdc4O35988 Gm45105-201ENSMUST00000207824 397 ntBASIC2.74□□□□□ -1.97
Sdc4O35988 Gm5649-201ENSMUST00000217918 951 ntBASIC2.74□□□□□ -1.97
Sdc4O35988 AC151907.1-201ENSMUST00000228812 412 ntBASIC2.74□□□□□ -1.97
Sdc4O35988 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Sdc4O35988 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC2.74□□□□□ -1.97
Sdc4O35988 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Sdc4O35988 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.74□□□□□ -1.97
Sdc4O35988 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.74□□□□□ -1.97
Sdc4O35988 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Sdc4O35988 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Sdc4O35988 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Sdc4O35988 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Sdc4O35988 Gm24122-201ENSMUST00000104107 132 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm22674-201ENSMUST00000104413 131 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Mir466k-201ENSMUST00000116774 122 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm9009-201ENSMUST00000117321 326 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm14775-201ENSMUST00000122089 310 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm24922-201ENSMUST00000158511 102 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm23409-201ENSMUST00000158516 237 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm17194-201ENSMUST00000164610 348 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Sdc4O35988 Mir3076-201ENSMUST00000175415 60 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm20660-201ENSMUST00000177515 289 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm7837-201ENSMUST00000190873 412 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.73□□□□□ -1.97
Sdc4O35988 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm18346-201ENSMUST00000216782 325 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 AC142113.2-201ENSMUST00000217425 748 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm4928-201ENSMUST00000219622 850 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.73□□□□□ -1.97
Sdc4O35988 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.73□□□□□ -1.97
Sdc4O35988 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Sdc4O35988 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms