Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 Gm25718-201ENSMUST00000158632 118 ntBASIC4.8□□□□□ -1.64
FxnO35943 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.8□□□□□ -1.64
FxnO35943 Gm22448-201ENSMUST00000179254 107 ntBASIC4.8□□□□□ -1.64
FxnO35943 Gm27409-201ENSMUST00000184727 80 ntBASIC4.8□□□□□ -1.64
FxnO35943 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.8□□□□□ -1.64
FxnO35943 Ighv2-8-201ENSMUST00000193935 262 ntBASIC4.8□□□□□ -1.64
FxnO35943 Trav5d-2-201ENSMUST00000196107 275 ntBASIC4.8□□□□□ -1.64
FxnO35943 Trav5n-2-201ENSMUST00000197136 275 ntBASIC4.8□□□□□ -1.64
FxnO35943 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.8□□□□□ -1.64
FxnO35943 Gm44391-201ENSMUST00000198490 93 ntBASIC4.8□□□□□ -1.64
FxnO35943 Gm4321-201ENSMUST00000200520 442 ntBASIC4.8□□□□□ -1.64
FxnO35943 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FxnO35943 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.8□□□□□ -1.64
FxnO35943 Gm44825-201ENSMUST00000207557 150 ntBASIC4.8□□□□□ -1.64
FxnO35943 Gm44598-201ENSMUST00000207566 150 ntBASIC4.8□□□□□ -1.64
FxnO35943 Gm45395-201ENSMUST00000209891 559 ntBASIC4.8□□□□□ -1.64
FxnO35943 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.8□□□□□ -1.64
FxnO35943 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC4.8□□□□□ -1.64
FxnO35943 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.8□□□□□ -1.64
FxnO35943 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.8□□□□□ -1.64
FxnO35943 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FxnO35943 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.8□□□□□ -1.64
FxnO35943 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
FxnO35943 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
FxnO35943 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.8□□□□□ -1.64
FxnO35943 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
FxnO35943 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FxnO35943 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.79□□□□□ -1.64
FxnO35943 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FxnO35943 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FxnO35943 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.79□□□□□ -1.64
FxnO35943 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
FxnO35943 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
FxnO35943 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FxnO35943 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
FxnO35943 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.79□□□□□ -1.64
FxnO35943 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FxnO35943 Gm11367-201ENSMUST00000117802 120 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm11794-201ENSMUST00000119446 237 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm25290-201ENSMUST00000122796 144 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.79□□□□□ -1.64
FxnO35943 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.79□□□□□ -1.64
FxnO35943 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.79□□□□□ -1.64
FxnO35943 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.79□□□□□ -1.64
FxnO35943 Gm22596-201ENSMUST00000157601 316 ntBASIC4.79□□□□□ -1.64
FxnO35943 Mir1970-201ENSMUST00000157839 104 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm23965-201ENSMUST00000157969 142 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm25907-201ENSMUST00000158486 125 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm8580-201ENSMUST00000160295 464 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm24415-201ENSMUST00000180218 107 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm27999-201ENSMUST00000183539 193 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm27688-201ENSMUST00000183634 91 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm27541-201ENSMUST00000184078 122 ntBASIC4.79□□□□□ -1.64
FxnO35943 Mir6481-201ENSMUST00000184617 110 ntBASIC4.79□□□□□ -1.64
FxnO35943 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
FxnO35943 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FxnO35943 Gm5368-201ENSMUST00000189012 589 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm19498-201ENSMUST00000191128 331 ntBASIC4.79□□□□□ -1.64
FxnO35943 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm9332-201ENSMUST00000198431 730 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.79□□□□□ -1.64
FxnO35943 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.79□□□□□ -1.64
FxnO35943 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.79□□□□□ -1.64
FxnO35943 AC130222.1-201ENSMUST00000221198 256 ntBASIC4.79□□□□□ -1.64
FxnO35943 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC4.79□□□□□ -1.64
FxnO35943 CT010454.1-201ENSMUST00000225975 265 ntBASIC4.79□□□□□ -1.64
FxnO35943 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.79□□□□□ -1.64
FxnO35943 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FxnO35943 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
FxnO35943 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.79□□□□□ -1.64
FxnO35943 Gm26446-201ENSMUST00000082455 103 ntBASIC4.79□□□□□ -1.64
FxnO35943 Gm37642-201ENSMUST00000193166 1735 ntBASIC4.79□□□□□ -1.64
FxnO35943 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.79□□□□□ -1.64
FxnO35943 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FxnO35943 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
FxnO35943 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FxnO35943 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
FxnO35943 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.78□□□□□ -1.64
FxnO35943 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.78□□□□□ -1.64
FxnO35943 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FxnO35943 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
FxnO35943 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
FxnO35943 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FxnO35943 Gm23941-201ENSMUST00000101953 107 ntBASIC4.78□□□□□ -1.64
FxnO35943 Gm25565-201ENSMUST00000104605 105 ntBASIC4.78□□□□□ -1.64
FxnO35943 Mir743b-201ENSMUST00000104751 77 ntBASIC4.78□□□□□ -1.64
FxnO35943 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
FxnO35943 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.78□□□□□ -1.64
FxnO35943 Gm13250-201ENSMUST00000117209 753 ntBASIC4.78□□□□□ -1.64
FxnO35943 Gm12646-201ENSMUST00000119144 238 ntBASIC4.78□□□□□ -1.64
FxnO35943 Gm12074-201ENSMUST00000120189 219 ntBASIC4.78□□□□□ -1.64
FxnO35943 Gm17014-201ENSMUST00000120765 168 ntBASIC4.78□□□□□ -1.64
FxnO35943 Gm25176-201ENSMUST00000122640 125 ntBASIC4.78□□□□□ -1.64
FxnO35943 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.78□□□□□ -1.64
FxnO35943 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FxnO35943 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
FxnO35943 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
FxnO35943 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.78□□□□□ -1.64
FxnO35943 Gm29512-201ENSMUST00000185544 315 ntBASIC4.78□□□□□ -1.64
FxnO35943 Gm28110-201ENSMUST00000185782 315 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms