Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm14622-201ENSMUST00000117117 468 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm8595-201ENSMUST00000118250 630 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm14521-201ENSMUST00000119545 350 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm14601-201ENSMUST00000120892 236 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm11582-201ENSMUST00000121041 236 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Mir1963-201ENSMUST00000158594 59 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm17183-201ENSMUST00000171170 493 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm24968-201ENSMUST00000179817 107 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm26960-201ENSMUST00000182263 412 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm28552-201ENSMUST00000190725 388 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm43304-201ENSMUST00000196803 326 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm24166-201ENSMUST00000082724 135 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm25401-201ENSMUST00000082975 106 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.35□□□□□ -1.71
Pcdh1F7BJK1 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm22273-201ENSMUST00000104040 132 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm24230-201ENSMUST00000104313 129 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm14823-201ENSMUST00000117698 238 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm14570-201ENSMUST00000119444 391 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm14926-201ENSMUST00000120650 508 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm22037-201ENSMUST00000157280 296 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm26373-201ENSMUST00000157833 103 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm24675-201ENSMUST00000158757 259 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm22529-201ENSMUST00000158817 123 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm3851-201ENSMUST00000168653 318 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm28399-201ENSMUST00000186221 318 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm28572-201ENSMUST00000187444 318 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm29365-201ENSMUST00000189461 699 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm28654-201ENSMUST00000189801 379 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm28467-201ENSMUST00000190981 318 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm38080-201ENSMUST00000194035 268 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm32453-201ENSMUST00000204183 456 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm44779-201ENSMUST00000206937 708 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm45252-201ENSMUST00000211579 397 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm23412-201ENSMUST00000083017 107 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm23459-201ENSMUST00000083259 131 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.34□□□□□ -1.71
Pcdh1F7BJK1 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Pcdh1F7BJK1 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.34□□□□□ -1.72
Pcdh1F7BJK1 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Pcdh1F7BJK1 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.34□□□□□ -1.72
Pcdh1F7BJK1 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Pcdh1F7BJK1 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Pcdh1F7BJK1 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Pcdh1F7BJK1 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Pcdh1F7BJK1 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Pcdh1F7BJK1 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Mir599-201ENSMUST00000102378 88 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm22831-201ENSMUST00000102473 109 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm25919-201ENSMUST00000104271 132 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm12760-201ENSMUST00000117861 482 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm12509-201ENSMUST00000118033 609 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm13887-201ENSMUST00000119009 344 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm12379-201ENSMUST00000119607 391 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm13518-201ENSMUST00000120018 233 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm11388-201ENSMUST00000120908 159 ntBASIC4.33□□□□□ -1.72
Pcdh1F7BJK1 Gm12650-201ENSMUST00000121966 258 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms