Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm25411-201ENSMUST00000083760 151 ntBASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm11874-201ENSMUST00000117437 130 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm16205-201ENSMUST00000117720 1027 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm12806-201ENSMUST00000119384 268 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm13368-201ENSMUST00000122443 430 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm12854-201ENSMUST00000128518 297 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm25624-201ENSMUST00000157222 275 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm26101-201ENSMUST00000157246 105 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm23450-201ENSMUST00000178285 91 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm16378-201ENSMUST00000179168 342 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Mir7012-201ENSMUST00000183900 64 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm27490-201ENSMUST00000184754 128 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm7654-201ENSMUST00000186738 683 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm19503-201ENSMUST00000187109 241 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm28097-201ENSMUST00000187333 366 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm7266-201ENSMUST00000187999 405 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm17953-201ENSMUST00000192061 667 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm43227-201ENSMUST00000202239 677 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm44142-201ENSMUST00000203358 311 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm44657-201ENSMUST00000208568 450 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm33601-201ENSMUST00000210001 961 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm45772-201ENSMUST00000212961 240 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm18904-201ENSMUST00000218756 329 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm3086-202ENSMUST00000221248 310 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 AC159231.1-201ENSMUST00000225365 226 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Ear14-201ENSMUST00000049559 468 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm9845-201ENSMUST00000056409 598 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm7665-201ENSMUST00000076710 297 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm25135-201ENSMUST00000082648 143 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm23330-201ENSMUST00000082660 164 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Mir452-201ENSMUST00000093629 85 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm32444-201ENSMUST00000195147 3511 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.17□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.16□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Trav13d-4A0A0G2JFX3 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms