Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm6801-201ENSMUST00000190697 339 ntBASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Gm9696-202ENSMUST00000191541 830 ntBASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Gm38053-201ENSMUST00000193938 160 ntBASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Gm37037-201ENSMUST00000194475 424 ntBASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Gm18445-201ENSMUST00000195502 774 ntBASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Ighv1-79-201ENSMUST00000200152 350 ntBASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Gm7726-201ENSMUST00000206241 231 ntBASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 AC155923.1-201ENSMUST00000215676 356 ntBASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 AC147615.1-201ENSMUST00000218914 441 ntBASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Gm5265-201ENSMUST00000076828 342 ntBASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Gm28359-201ENSMUST00000187470 1322 ntBASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Trav8-1A0A075B641 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm14771-201ENSMUST00000118249 203 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm12803-201ENSMUST00000118907 821 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm14162-201ENSMUST00000121985 601 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm11229-201ENSMUST00000121993 437 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm27044-201ENSMUST00000183033 796 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Mir6393-201ENSMUST00000183709 94 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm7870-201ENSMUST00000184467 616 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm20915-201ENSMUST00000191575 663 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm43316-201ENSMUST00000197252 1295 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm43626-201ENSMUST00000198575 162 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm32381-201ENSMUST00000203192 476 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm44600-201ENSMUST00000208540 111 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm44555-201ENSMUST00000209008 148 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm18892-201ENSMUST00000217628 881 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Gm8249-201ENSMUST00000219225 465 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 AC241593.1-201ENSMUST00000224768 397 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 AC107757.3-201ENSMUST00000226312 535 ntBASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Trav8-1A0A075B641 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.12
Trav8-1A0A075B641 Gm37236-201ENSMUST00000193670 3249 ntBASIC1.84□□□□□ -2.12
Trav8-1A0A075B641 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Trav8-1A0A075B641 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Trav8-1A0A075B641 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.84□□□□□ -2.12
Trav8-1A0A075B641 Gm43092-201ENSMUST00000202986 1854 ntBASIC1.84□□□□□ -2.12
Trav8-1A0A075B641 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm12697-201ENSMUST00000118008 667 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm14240-201ENSMUST00000120353 546 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm15272-201ENSMUST00000120865 233 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm12095-201ENSMUST00000121962 816 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm26411-201ENSMUST00000157668 107 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm24745-201ENSMUST00000157840 85 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm25360-201ENSMUST00000178786 191 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm4854-201ENSMUST00000185902 574 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm29525-201ENSMUST00000189844 699 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm38311-201ENSMUST00000192945 165 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm43090-201ENSMUST00000202459 314 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm44964-201ENSMUST00000207011 273 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm8681-201ENSMUST00000219115 618 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 AC160114.1-201ENSMUST00000221930 365 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Gm26458-201ENSMUST00000082832 128 ntBASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Trav8-1A0A075B641 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Gm24280-201ENSMUST00000104237 134 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Gm22345-201ENSMUST00000122644 107 ntBASIC1.82□□□□□ -2.12
Trav8-1A0A075B641 Gm14389-201ENSMUST00000140453 241 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms