Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm25874-201ENSMUST00000178030 79 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm24925-201ENSMUST00000178157 107 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Mir6960-201ENSMUST00000183449 61 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm3454-201ENSMUST00000185571 412 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm20811-201ENSMUST00000190500 553 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm36966-201ENSMUST00000192217 413 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm8242-202ENSMUST00000193056 475 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm2314-201ENSMUST00000200391 586 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm7540-201ENSMUST00000219764 926 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 AC158525.1-201ENSMUST00000223806 576 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 AC167192.1-201ENSMUST00000225908 139 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
H2afb1S4R1E0 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm23271-201ENSMUST00000104052 124 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm8858-201ENSMUST00000118259 342 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm14945-201ENSMUST00000119556 1118 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm14360-201ENSMUST00000120670 393 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm11891-201ENSMUST00000121241 619 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm11982-201ENSMUST00000121480 314 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm12317-201ENSMUST00000122307 319 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm11506-201ENSMUST00000122414 470 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm25873-201ENSMUST00000180317 107 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm27861-201ENSMUST00000183920 214 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm28615-201ENSMUST00000187527 482 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm28356-202ENSMUST00000187566 858 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm5829-201ENSMUST00000191383 351 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm37337-201ENSMUST00000192601 993 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm37698-201ENSMUST00000192605 463 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm37979-201ENSMUST00000193065 712 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm37428-201ENSMUST00000193886 137 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm43096-201ENSMUST00000196173 421 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm43441-201ENSMUST00000201458 205 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm7726-201ENSMUST00000206241 231 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm18644-201ENSMUST00000211458 815 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
H2afb1S4R1E0 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Mir466f-2-201ENSMUST00000104805 94 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm15108-201ENSMUST00000116160 803 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm13650-201ENSMUST00000117729 433 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm15312-201ENSMUST00000118827 271 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm7219-201ENSMUST00000119619 297 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm15309-201ENSMUST00000121644 240 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms