Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm15231-201ENSMUST00000119174 447 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm12495-201ENSMUST00000119750 447 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm14534-201ENSMUST00000120045 357 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm8840-201ENSMUST00000122454 386 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Snord53-201ENSMUST00000175146 78 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm2092-201ENSMUST00000178887 639 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm2759-201ENSMUST00000179938 639 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm29658-201ENSMUST00000185404 230 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm18892-201ENSMUST00000217628 881 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trem3Q9JKE1 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm25764-201ENSMUST00000104092 134 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm14739-201ENSMUST00000120424 802 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm15799-201ENSMUST00000120899 289 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm11229-201ENSMUST00000121993 437 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm25427-201ENSMUST00000157605 103 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm22330-201ENSMUST00000158068 115 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm16300-201ENSMUST00000160031 1279 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm32381-201ENSMUST00000203192 476 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trem3Q9JKE1 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.28□□□□□ -2.05
Trem3Q9JKE1 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Trem3Q9JKE1 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm14162-201ENSMUST00000121985 601 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm15367-201ENSMUST00000122398 1016 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm13901-201ENSMUST00000137252 468 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm5967-201ENSMUST00000172723 494 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm22853-201ENSMUST00000174974 131 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Snord93-201ENSMUST00000175580 71 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm4854-201ENSMUST00000185902 574 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm43214-201ENSMUST00000199242 352 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Gm7751-201ENSMUST00000212868 709 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trem3Q9JKE1 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms