Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm28354-201ENSMUST00000190904 678 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Gm18015-201ENSMUST00000214879 316 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Cdc40Q9DC48 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm14518-201ENSMUST00000117351 542 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm15126-201ENSMUST00000118631 833 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm24289-201ENSMUST00000157629 135 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Mir5127-201ENSMUST00000175295 71 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm24417-201ENSMUST00000178123 79 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm24653-201ENSMUST00000178541 79 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm25934-201ENSMUST00000178642 79 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm25412-201ENSMUST00000180258 107 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm27374-201ENSMUST00000183660 81 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm28141-201ENSMUST00000186676 342 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm37428-201ENSMUST00000193886 137 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm45316-201ENSMUST00000210128 162 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Gm7948-201ENSMUST00000212607 844 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Platr25-208ENSMUST00000222602 939 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Cdc40Q9DC48 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm12782-201ENSMUST00000117519 727 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm11577-201ENSMUST00000118030 737 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm12137-201ENSMUST00000119565 346 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm11693-201ENSMUST00000119625 565 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm16445-201ENSMUST00000120399 714 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm14578-201ENSMUST00000122166 391 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm22956-201ENSMUST00000122520 80 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm23791-201ENSMUST00000122553 293 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm23716-201ENSMUST00000157348 144 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm16569-201ENSMUST00000160526 314 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm22693-201ENSMUST00000175049 442 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm6590-201ENSMUST00000203343 687 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm44594-201ENSMUST00000208982 407 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm6842-201ENSMUST00000211361 390 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm45273-201ENSMUST00000211559 281 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm45814-201ENSMUST00000212646 775 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm18039-201ENSMUST00000217816 728 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm22043-201ENSMUST00000082993 158 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.01□□□□□ -1.93
Cdc40Q9DC48 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Cdc40Q9DC48 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Cdc40Q9DC48 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms