Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Mir1195-201ENSMUST00000116818 98 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm24213-201ENSMUST00000158255 258 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm15508-201ENSMUST00000160330 325 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm20651-201ENSMUST00000177219 329 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm5731-201ENSMUST00000190969 481 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm33973-201ENSMUST00000195148 534 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm45078-201ENSMUST00000205343 546 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm45034-201ENSMUST00000206831 482 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.96□□□□□ -1.94
Ccdc3Q9D6Y1 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Gm11229-201ENSMUST00000121993 437 ntBASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Gm5392-201ENSMUST00000122189 789 ntBASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Gm26041-201ENSMUST00000158148 108 ntBASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Gm32222-201ENSMUST00000203296 298 ntBASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ccdc3Q9D6Y1 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm15530-201ENSMUST00000122206 555 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm27532-201ENSMUST00000183726 113 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Mir7014-201ENSMUST00000183853 63 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm7540-201ENSMUST00000219764 926 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm26176-201ENSMUST00000083795 105 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Ccdc3Q9D6Y1 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Gm15733-201ENSMUST00000132957 242 ntBASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Gm24691-201ENSMUST00000157762 140 ntBASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Gm42438-201ENSMUST00000197832 974 ntBASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Gm18748-201ENSMUST00000198507 622 ntBASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Gm43239-201ENSMUST00000200131 201 ntBASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.93□□□□□ -1.94
Ccdc3Q9D6Y1 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms