Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm13379-201ENSMUST00000118053 621 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm12090-201ENSMUST00000118692 758 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm12587-201ENSMUST00000120180 427 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm13676-201ENSMUST00000122185 591 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm24061-201ENSMUST00000157489 120 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm23505-201ENSMUST00000158989 130 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm23777-201ENSMUST00000158994 259 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm16569-201ENSMUST00000160526 314 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm10075-201ENSMUST00000162030 545 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm18340-201ENSMUST00000196342 609 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 AC162934.3-201ENSMUST00000223015 841 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 AF357428-201ENSMUST00000083815 69 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.84□□□□□ -1.79
Ccdc39Q9D5Y1 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.84□□□□□ -1.8
Ccdc39Q9D5Y1 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.84□□□□□ -1.8
Ccdc39Q9D5Y1 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm24340-201ENSMUST00000104208 97 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm22023-201ENSMUST00000104354 130 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm11488-201ENSMUST00000117277 863 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm11576-201ENSMUST00000117433 417 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm14647-201ENSMUST00000119392 680 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm15488-201ENSMUST00000121682 670 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm23791-201ENSMUST00000122553 293 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm27249-201ENSMUST00000185049 328 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm5552-201ENSMUST00000197149 515 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm5322-201ENSMUST00000206142 699 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm44594-201ENSMUST00000208982 407 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm45409-201ENSMUST00000211486 252 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm18225-201ENSMUST00000216708 742 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm5175-202ENSMUST00000219699 529 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm22043-201ENSMUST00000082993 158 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.83□□□□□ -1.8
Ccdc39Q9D5Y1 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Gm42736-201ENSMUST00000200723 1353 ntBASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Gm22817-201ENSMUST00000157448 356 ntBASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Gm22339-201ENSMUST00000157718 62 ntBASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Gm3470-201ENSMUST00000160819 420 ntBASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 Gm18704-201ENSMUST00000219736 446 ntBASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 AC153646.1-201ENSMUST00000223229 1279 ntBASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.82□□□□□ -1.8
Ccdc39Q9D5Y1 CT025538.2-201ENSMUST00000226083 772 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms