Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm25519-201ENSMUST00000158392 127 ntBASIC3.01□□□□□ -1.93
Use1Q9CQ56 Gm16026-202ENSMUST00000159695 772 ntBASIC3.01□□□□□ -1.93
Use1Q9CQ56 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Use1Q9CQ56 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.01□□□□□ -1.93
Use1Q9CQ56 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.01□□□□□ -1.93
Use1Q9CQ56 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.01□□□□□ -1.93
Use1Q9CQ56 Gm27921-201ENSMUST00000183968 108 ntBASIC3.01□□□□□ -1.93
Use1Q9CQ56 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.01□□□□□ -1.93
Use1Q9CQ56 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Use1Q9CQ56 Gm43407-201ENSMUST00000199816 317 ntBASIC3.01□□□□□ -1.93
Use1Q9CQ56 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.01□□□□□ -1.93
Use1Q9CQ56 Gm19233-201ENSMUST00000219772 936 ntBASIC3.01□□□□□ -1.93
Use1Q9CQ56 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Use1Q9CQ56 Gm18116-201ENSMUST00000220920 537 ntBASIC3.01□□□□□ -1.93
Use1Q9CQ56 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.01□□□□□ -1.93
Use1Q9CQ56 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.01□□□□□ -1.93
Use1Q9CQ56 Gm9765-201ENSMUST00000043170 321 ntBASIC3.01□□□□□ -1.93
Use1Q9CQ56 Gm22970-201ENSMUST00000083304 186 ntBASIC3.01□□□□□ -1.93
Use1Q9CQ56 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Use1Q9CQ56 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Use1Q9CQ56 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Use1Q9CQ56 Gm6207-201ENSMUST00000120075 1386 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm6228-201ENSMUST00000178856 1386 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Use1Q9CQ56 Gm6545-201ENSMUST00000217186 1786 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Use1Q9CQ56 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3□□□□□ -1.93
Use1Q9CQ56 Mir599-201ENSMUST00000102378 88 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3□□□□□ -1.93
Use1Q9CQ56 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3□□□□□ -1.93
Use1Q9CQ56 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3□□□□□ -1.93
Use1Q9CQ56 Gm12213-201ENSMUST00000119924 353 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm13210-201ENSMUST00000121483 273 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm15065-201ENSMUST00000121699 273 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm24936-201ENSMUST00000122598 247 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Use1Q9CQ56 Mir5136-201ENSMUST00000175573 76 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm22252-201ENSMUST00000179316 79 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Mir6385-201ENSMUST00000184295 105 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm18433-202ENSMUST00000195682 196 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Trdv3-201ENSMUST00000198551 309 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm5551-201ENSMUST00000199720 690 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3□□□□□ -1.93
Use1Q9CQ56 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3□□□□□ -1.93
Use1Q9CQ56 Gm43039-201ENSMUST00000202883 963 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm44425-201ENSMUST00000203739 429 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Use1Q9CQ56 Gm45192-201ENSMUST00000206749 283 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm19126-201ENSMUST00000207896 509 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm34779-201ENSMUST00000210036 263 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm45588-201ENSMUST00000211213 630 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm18892-201ENSMUST00000217628 881 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Gm17872-201ENSMUST00000222550 532 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 AC158392.2-201ENSMUST00000225402 969 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 AC124729.1-202ENSMUST00000225587 938 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 AC166369.1-201ENSMUST00000228126 351 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 AC109172.2-201ENSMUST00000228792 381 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Use1Q9CQ56 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3□□□□□ -1.93
Use1Q9CQ56 Olfr1193-201ENSMUST00000081697 957 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Use1Q9CQ56 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Use1Q9CQ56 Gm14910-201ENSMUST00000121037 1805 ntBASIC3□□□□□ -1.93
Use1Q9CQ56 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3□□□□□ -1.93
Use1Q9CQ56 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm12149-201ENSMUST00000117511 654 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm24914-201ENSMUST00000157285 313 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm7346-201ENSMUST00000169661 476 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm20612-201ENSMUST00000176318 236 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm5473-201ENSMUST00000179326 642 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm29513-201ENSMUST00000185741 202 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Use1Q9CQ56 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm17966-201ENSMUST00000193453 594 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm45245-201ENSMUST00000210082 376 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm7380-201ENSMUST00000211599 466 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm45742-201ENSMUST00000212400 433 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 Gm35262-201ENSMUST00000215133 267 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.99□□□□□ -1.93
Use1Q9CQ56 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Use1Q9CQ56 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms