Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm10292-202ENSMUST00000193165 585 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm20056-201ENSMUST00000194813 519 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm18100-201ENSMUST00000200897 452 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm7825-201ENSMUST00000204046 416 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm18854-201ENSMUST00000211196 329 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm19326-201ENSMUST00000219818 326 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm5215-201ENSMUST00000054380 405 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm10092-201ENSMUST00000077110 180 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm25134-201ENSMUST00000082646 160 ntBASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Trim11Q99PQ2 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm23424-201ENSMUST00000103889 110 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm5757-201ENSMUST00000117494 528 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm13491-201ENSMUST00000118267 235 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm11325-201ENSMUST00000119967 469 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm13132-201ENSMUST00000121194 472 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm11229-201ENSMUST00000121993 437 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm24402-201ENSMUST00000157873 91 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm26169-201ENSMUST00000158420 135 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm16569-201ENSMUST00000160526 314 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm26960-201ENSMUST00000182263 412 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Mir6401-201ENSMUST00000184499 109 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm29509-201ENSMUST00000185716 321 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm6137-201ENSMUST00000187552 578 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm28389-201ENSMUST00000190090 697 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm17954-201ENSMUST00000195893 607 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm18306-201ENSMUST00000207338 569 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm25126-201ENSMUST00000083343 102 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim11Q99PQ2 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Mir875-201ENSMUST00000104698 78 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm15526-201ENSMUST00000112504 204 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm13046-201ENSMUST00000117391 501 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm8129-201ENSMUST00000118230 213 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm14775-201ENSMUST00000122089 310 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm23411-201ENSMUST00000157988 62 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm25433-201ENSMUST00000158283 286 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm23704-201ENSMUST00000158844 340 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm21991-201ENSMUST00000180006 508 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Mir6343-201ENSMUST00000183584 84 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Mir6355-201ENSMUST00000183687 106 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Mir7674-201ENSMUST00000184964 63 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm29192-201ENSMUST00000190942 377 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm28872-201ENSMUST00000191518 158 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm43601-201ENSMUST00000196294 945 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm42990-201ENSMUST00000199231 312 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm44543-201ENSMUST00000209136 396 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 Gm45730-201ENSMUST00000212560 395 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.52□□□□□ -1.53
Trim11Q99PQ2 AC159380.1-201ENSMUST00000218096 121 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms