Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm10552-201ENSMUST00000113396 372 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm13550-201ENSMUST00000118185 525 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm12819-201ENSMUST00000122223 629 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm4487-201ENSMUST00000150617 442 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm20462-201ENSMUST00000172623 408 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm23619-201ENSMUST00000178411 94 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm25474-201ENSMUST00000179052 94 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm22047-201ENSMUST00000179176 94 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Mir6541-201ENSMUST00000183649 110 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm28552-201ENSMUST00000190725 388 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm38270-201ENSMUST00000192721 407 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm37416-201ENSMUST00000193596 318 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm37817-201ENSMUST00000195276 434 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm43730-201ENSMUST00000199863 372 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm44923-201ENSMUST00000206673 85 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm18320-201ENSMUST00000211304 595 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm23614-201ENSMUST00000082598 107 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.77□□□□□ -1.65
Ushbp1Q8R370 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ushbp1Q8R370 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm12568-201ENSMUST00000117362 624 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm12370-201ENSMUST00000117809 604 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm13454-201ENSMUST00000118166 483 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm13482-201ENSMUST00000119842 254 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm23118-201ENSMUST00000122657 187 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm2020-201ENSMUST00000145242 579 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm25334-201ENSMUST00000158036 110 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Mir3112-201ENSMUST00000175431 82 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm22584-201ENSMUST00000177935 92 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm28666-201ENSMUST00000186649 274 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm29045-201ENSMUST00000187278 698 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm29634-201ENSMUST00000188467 696 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm28699-201ENSMUST00000189193 696 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm44465-201ENSMUST00000199536 114 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm39197-201ENSMUST00000212069 457 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm46138-201ENSMUST00000215294 426 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
Ushbp1Q8R370 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm24120-201ENSMUST00000103978 129 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm25560-201ENSMUST00000104606 176 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm5757-201ENSMUST00000117494 528 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm12509-201ENSMUST00000118033 609 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm14714-201ENSMUST00000119743 439 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm14159-201ENSMUST00000119832 451 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm14366-201ENSMUST00000121970 730 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm22986-201ENSMUST00000122753 130 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm22765-201ENSMUST00000158371 128 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm16101-201ENSMUST00000160695 430 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Mir713-201ENSMUST00000178651 108 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Mir6951-201ENSMUST00000183910 75 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Mir6537-201ENSMUST00000184150 110 ntBASIC4.75□□□□□ -1.65
Ushbp1Q8R370 Gm29335-201ENSMUST00000188361 459 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms