Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Mir20a-201ENSMUST00000083508 107 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim47Q8C0E3 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm11935-201ENSMUST00000118608 399 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm13729-201ENSMUST00000120328 406 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm11849-201ENSMUST00000121293 261 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm22145-201ENSMUST00000157396 148 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm22598-201ENSMUST00000157600 127 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm24191-201ENSMUST00000157977 122 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm26354-201ENSMUST00000158221 129 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm23700-201ENSMUST00000158842 102 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm27528-201ENSMUST00000183544 205 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm43408-201ENSMUST00000198263 440 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm44825-201ENSMUST00000207557 150 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm44598-201ENSMUST00000207566 150 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm29884-201ENSMUST00000218403 453 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm10033-201ENSMUST00000072427 1813 ntBASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim47Q8C0E3 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Mir743b-201ENSMUST00000104751 77 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm11486-201ENSMUST00000107322 478 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm15560-201ENSMUST00000117107 643 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm14101-201ENSMUST00000121502 473 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm16060-201ENSMUST00000153140 478 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm22097-201ENSMUST00000157929 278 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm26585-201ENSMUST00000180890 630 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm27421-201ENSMUST00000184729 167 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 BX530055.1-201ENSMUST00000197285 122 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Mir691-201ENSMUST00000199719 78 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm8319-201ENSMUST00000205708 641 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Mir31-201ENSMUST00000083474 106 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim47Q8C0E3 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Mir541-201ENSMUST00000102097 90 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Mir92b-201ENSMUST00000102300 83 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm25938-201ENSMUST00000104139 166 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm13664-201ENSMUST00000117304 345 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm15783-201ENSMUST00000117521 633 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Gm14971-201ENSMUST00000117980 663 ntBASIC5.72□□□□□ -1.49
Trim47Q8C0E3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms