Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm23473-201ENSMUST00000158883 116 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm26866-201ENSMUST00000180414 802 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm37455-201ENSMUST00000191993 529 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm43304-201ENSMUST00000196803 326 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm43114-201ENSMUST00000198298 343 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm45553-201ENSMUST00000209929 507 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 AC154374.1-201ENSMUST00000215351 351 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm20304-201ENSMUST00000218168 444 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 AC173482.1-201ENSMUST00000224494 3815 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm24319-201ENSMUST00000083389 107 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Mir370-201ENSMUST00000083499 79 ntBASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Usp40Q8BWR4 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm22019-201ENSMUST00000104359 96 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm13478-201ENSMUST00000118312 413 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm23545-201ENSMUST00000158205 104 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm25874-201ENSMUST00000178030 79 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm26746-201ENSMUST00000181722 487 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm27254-201ENSMUST00000183926 517 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 AC156025.1-201ENSMUST00000223597 3551 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Usp40Q8BWR4 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.62□□□□□ -1.51
Usp40Q8BWR4 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm23271-201ENSMUST00000104052 124 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm11403-201ENSMUST00000122195 369 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm23112-201ENSMUST00000158606 125 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm15974-201ENSMUST00000159103 531 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm7241-201ENSMUST00000159853 357 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Trbv10-201ENSMUST00000168322 289 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm23365-201ENSMUST00000175019 125 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm25960-201ENSMUST00000175110 125 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm44453-201ENSMUST00000175161 126 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm25195-201ENSMUST00000177656 126 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm25451-201ENSMUST00000177832 121 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm10067-201ENSMUST00000179462 348 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm29408-201ENSMUST00000187536 216 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm37791-201ENSMUST00000195081 286 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm9057-201ENSMUST00000198791 296 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm43424-201ENSMUST00000200484 253 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 n-R5s79-201ENSMUST00000083071 120 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Mir132-201ENSMUST00000083603 66 ntBASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Usp40Q8BWR4 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms