Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm29475-201ENSMUST00000190767 312 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim56Q80VI1 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim56Q80VI1 Nras-ps2-201ENSMUST00000195269 178 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 Gm4714-201ENSMUST00000203395 279 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 Gm17811-201ENSMUST00000206193 387 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim56Q80VI1 Gm25792-201ENSMUST00000083289 100 ntBASIC5.4□□□□□ -1.54
Trim56Q80VI1 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim56Q80VI1 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Trim56Q80VI1 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim56Q80VI1 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Trim56Q80VI1 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Trim56Q80VI1 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim56Q80VI1 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Trim56Q80VI1 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim56Q80VI1 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim56Q80VI1 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm13064-201ENSMUST00000119125 557 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm12852-201ENSMUST00000119478 719 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm12466-201ENSMUST00000121199 620 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm11229-201ENSMUST00000121993 437 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm26024-201ENSMUST00000158657 322 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm22243-201ENSMUST00000178754 120 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm21850-201ENSMUST00000179792 359 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm27564-201ENSMUST00000185196 96 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim56Q80VI1 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm36891-201ENSMUST00000191995 655 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm45651-201ENSMUST00000210857 335 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim56Q80VI1 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm22423-201ENSMUST00000082861 184 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm23848-201ENSMUST00000083826 106 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim56Q80VI1 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Trim56Q80VI1 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.39□□□□□ -1.55
Trim56Q80VI1 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Mir193b-201ENSMUST00000103784 79 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm24889-201ENSMUST00000104388 132 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm11633-201ENSMUST00000118176 444 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm14566-201ENSMUST00000118915 321 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm14101-201ENSMUST00000121502 473 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm23959-201ENSMUST00000157208 324 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm27940-201ENSMUST00000184449 98 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Mir7028-201ENSMUST00000185016 64 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm37616-201ENSMUST00000193974 322 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Mir466e-201ENSMUST00000198862 84 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm44609-201ENSMUST00000207157 460 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm45499-201ENSMUST00000211656 280 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim56Q80VI1 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm25929-201ENSMUST00000082784 107 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim56Q80VI1 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim56Q80VI1 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms