Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm25419-201ENSMUST00000104215 191 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm11790-201ENSMUST00000119569 455 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm16179-201ENSMUST00000120685 373 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm14601-201ENSMUST00000120892 236 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm23496-201ENSMUST00000157741 248 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm24216-201ENSMUST00000158259 117 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm24810-201ENSMUST00000175317 70 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm20794-201ENSMUST00000177626 628 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm7909-201ENSMUST00000182688 614 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm27960-201ENSMUST00000183445 184 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Mir6416-201ENSMUST00000183664 117 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Mir6951-201ENSMUST00000183910 75 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm32447-201ENSMUST00000194265 697 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Crs-ps-201ENSMUST00000203723 760 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm5322-201ENSMUST00000206142 699 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 AC154600.1-201ENSMUST00000226480 714 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm23459-201ENSMUST00000083259 131 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Mir7-2-201ENSMUST00000083675 97 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Rnf220Q6PDX6 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm25758-201ENSMUST00000103987 129 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm25418-201ENSMUST00000104214 129 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm12787-201ENSMUST00000119234 396 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm11582-201ENSMUST00000121041 236 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm11849-201ENSMUST00000121293 261 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm14694-201ENSMUST00000121856 282 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm22107-201ENSMUST00000122548 100 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm11507-201ENSMUST00000156462 412 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm23960-201ENSMUST00000157206 131 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm5558-201ENSMUST00000178933 495 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm27385-201ENSMUST00000184747 104 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm28957-201ENSMUST00000190174 373 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm19498-201ENSMUST00000191128 331 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Trbv24-201ENSMUST00000194614 347 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm17781-201ENSMUST00000195232 649 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm19908-201ENSMUST00000204684 391 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf220Q6PDX6 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Rnf220Q6PDX6 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Rnf220Q6PDX6 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rnf220Q6PDX6 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms