Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm22272-201ENSMUST00000104039 134 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm12039-201ENSMUST00000118219 180 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm14287-201ENSMUST00000121060 117 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm24750-201ENSMUST00000157843 104 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm24976-201ENSMUST00000158972 135 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm3027-201ENSMUST00000167579 451 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm3104-201ENSMUST00000171004 473 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Mup-ps11-201ENSMUST00000178040 545 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Mup-ps3-201ENSMUST00000178315 545 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm22633-201ENSMUST00000179834 107 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm26960-201ENSMUST00000182263 412 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Mir6355-201ENSMUST00000183687 106 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm6988-201ENSMUST00000222676 375 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm21937-201ENSMUST00000222825 218 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Sh3rf1Q69ZI1 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 AC164297.1-201ENSMUST00000224484 1561 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm13973-201ENSMUST00000121371 894 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm22958-201ENSMUST00000122512 184 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm23167-201ENSMUST00000157155 103 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm22725-201ENSMUST00000158092 110 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm19206-201ENSMUST00000186401 827 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm43408-201ENSMUST00000198263 440 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm26263-201ENSMUST00000083281 164 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm22293-201ENSMUST00000083314 109 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Mir17-201ENSMUST00000083574 84 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm15088-201ENSMUST00000117973 1508 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm15098-201ENSMUST00000119036 1508 ntBASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Gm43696-201ENSMUST00000199385 6071 ntBASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Gm25418-201ENSMUST00000104214 129 ntBASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Gm23746-201ENSMUST00000104229 125 ntBASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Gm13250-201ENSMUST00000117209 753 ntBASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Gm8129-201ENSMUST00000118230 213 ntBASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Gm17014-201ENSMUST00000120765 168 ntBASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Gm24371-201ENSMUST00000122662 267 ntBASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Gm25293-201ENSMUST00000122792 285 ntBASIC5□□□□□ -1.61
Sh3rf1Q69ZI1 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms