Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim28Q62318 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim28Q62318 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim28Q62318 Gm26156-201ENSMUST00000116999 123 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm13672-201ENSMUST00000117554 459 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm15268-201ENSMUST00000118845 352 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm14001-201ENSMUST00000118847 247 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm15266-201ENSMUST00000119635 255 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm14506-201ENSMUST00000121165 536 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm12358-201ENSMUST00000121842 520 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim28Q62318 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim28Q62318 Mir6411-201ENSMUST00000183556 108 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm29556-201ENSMUST00000187591 696 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim28Q62318 Gm37239-201ENSMUST00000193510 141 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim28Q62318 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC5.07□□□□□ -1.6
Trim28Q62318 Gm44142-201ENSMUST00000203358 311 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm17991-201ENSMUST00000208139 297 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm3690-201ENSMUST00000211341 262 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm29818-201ENSMUST00000218070 165 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm7530-201ENSMUST00000218466 605 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm46193-201ENSMUST00000219399 364 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm4036-201ENSMUST00000220842 626 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Gm3086-202ENSMUST00000221248 310 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim28Q62318 Gm24490-201ENSMUST00000083803 98 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 n-R5s182-201ENSMUST00000083889 107 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim28Q62318 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim28Q62318 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim28Q62318 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 AC163660.3-201ENSMUST00000224253 1563 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim28Q62318 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Trim28Q62318 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim28Q62318 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trim28Q62318 Gm42755-201ENSMUST00000198533 1493 ntBASIC5.07□□□□□ -1.6
Trim28Q62318 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim28Q62318 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim28Q62318 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim28Q62318 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim28Q62318 Gm24273-201ENSMUST00000102332 164 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm22656-201ENSMUST00000104199 171 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm12230-201ENSMUST00000118301 454 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm11448-201ENSMUST00000120427 450 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm14919-201ENSMUST00000120839 390 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm15267-201ENSMUST00000120888 464 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm14977-201ENSMUST00000121626 812 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.06□□□□□ -1.6
Trim28Q62318 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim28Q62318 Gm23068-201ENSMUST00000158239 293 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC5.06□□□□□ -1.6
Trim28Q62318 Gm9593-201ENSMUST00000166034 469 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm17030-201ENSMUST00000167016 393 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm22166-201ENSMUST00000178419 121 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm23288-201ENSMUST00000179213 121 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Mir7676-1-201ENSMUST00000183491 62 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Mir7676-2-201ENSMUST00000183523 62 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm27392-201ENSMUST00000185041 101 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim28Q62318 Gm37193-201ENSMUST00000193087 513 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC5.06□□□□□ -1.6
Trim28Q62318 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm44060-201ENSMUST00000204440 410 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm18507-201ENSMUST00000218855 525 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 AC160970.1-201ENSMUST00000219311 475 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm8231-201ENSMUST00000221617 783 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 AC104832.1-201ENSMUST00000222938 550 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 AC144628.2-201ENSMUST00000227374 352 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm12582-201ENSMUST00000030555 697 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Gm24319-201ENSMUST00000083389 107 ntBASIC5.06□□□□□ -1.6
Trim28Q62318 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim28Q62318 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim28Q62318 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim28Q62318 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim28Q62318 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Trim28Q62318 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim28Q62318 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trim28Q62318 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim28Q62318 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim28Q62318 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trim28Q62318 Gm15613-201ENSMUST00000118396 326 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Gm15452-201ENSMUST00000119877 240 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Gm22514-201ENSMUST00000122547 308 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC5.05□□□□□ -1.6
Trim28Q62318 Gm24534-201ENSMUST00000157949 291 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Gm15946-201ENSMUST00000160654 423 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trim28Q62318 Gm26556-201ENSMUST00000180645 320 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Gm26746-201ENSMUST00000181722 487 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Mir6385-201ENSMUST00000184295 105 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Gm5116-201ENSMUST00000187732 463 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Gm29627-201ENSMUST00000187984 463 ntBASIC5.05□□□□□ -1.6
Trim28Q62318 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms