Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm11893-201ENSMUST00000117829 491 ntBASIC3.12□□□□□ -1.91
Scn9aQ62205 Gm15974-201ENSMUST00000159103 531 ntBASIC3.12□□□□□ -1.91
Scn9aQ62205 Gm7582-201ENSMUST00000160831 603 ntBASIC3.12□□□□□ -1.91
Scn9aQ62205 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Scn9aQ62205 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Scn9aQ62205 Gm19080-201ENSMUST00000196082 550 ntBASIC3.12□□□□□ -1.91
Scn9aQ62205 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC3.12□□□□□ -1.91
Scn9aQ62205 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC3.12□□□□□ -1.91
Scn9aQ62205 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Scn9aQ62205 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.12□□□□□ -1.91
Scn9aQ62205 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Scn9aQ62205 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Scn9aQ62205 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Scn9aQ62205 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Gm15785-201ENSMUST00000119145 694 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Gm16017-201ENSMUST00000119834 208 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Gm12956-201ENSMUST00000122184 414 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Gm28637-201ENSMUST00000179424 345 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Gm9696-202ENSMUST00000191541 830 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Gm37720-201ENSMUST00000195497 1241 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 AC129017.1-201ENSMUST00000228363 270 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Scn9aQ62205 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Scn9aQ62205 Gm43882-201ENSMUST00000204871 2264 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Scn9aQ62205 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Scn9aQ62205 Gm43662-201ENSMUST00000198310 2271 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Gm12757-201ENSMUST00000119465 800 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Scn9aQ62205 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.11□□□□□ -1.91
Scn9aQ62205 Gm8807-201ENSMUST00000179328 492 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Gm27535-201ENSMUST00000183814 157 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Scn9aQ62205 AF357341-201ENSMUST00000083088 75 ntBASIC3.11□□□□□ -1.91
Scn9aQ62205 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Scn9aQ62205 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Scn9aQ62205 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.1□□□□□ -1.91
Scn9aQ62205 Gm11943-201ENSMUST00000119473 327 ntBASIC3.1□□□□□ -1.91
Scn9aQ62205 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Scn9aQ62205 Gm24876-201ENSMUST00000158780 92 ntBASIC3.1□□□□□ -1.91
Scn9aQ62205 Gm19057-201ENSMUST00000194329 1197 ntBASIC3.1□□□□□ -1.91
Scn9aQ62205 Igkv12-49-201ENSMUST00000197714 278 ntBASIC3.1□□□□□ -1.91
Scn9aQ62205 Gm44208-201ENSMUST00000205199 421 ntBASIC3.1□□□□□ -1.91
Scn9aQ62205 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Scn9aQ62205 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.1□□□□□ -1.91
Scn9aQ62205 Gm23950-201ENSMUST00000104026 129 ntBASIC3.09□□□□□ -1.91
Scn9aQ62205 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC3.09□□□□□ -1.91
Scn9aQ62205 Gm25106-201ENSMUST00000122672 134 ntBASIC3.09□□□□□ -1.91
Scn9aQ62205 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Scn9aQ62205 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.09□□□□□ -1.91
Scn9aQ62205 Gm22264-201ENSMUST00000178200 107 ntBASIC3.09□□□□□ -1.91
Scn9aQ62205 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Scn9aQ62205 Gm21742-201ENSMUST00000189352 548 ntBASIC3.09□□□□□ -1.91
Scn9aQ62205 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.09□□□□□ -1.91
Scn9aQ62205 Gm44845-201ENSMUST00000208773 335 ntBASIC3.09□□□□□ -1.91
Scn9aQ62205 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.09□□□□□ -1.91
Scn9aQ62205 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Scn9aQ62205 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Scn9aQ62205 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Scn9aQ62205 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.09□□□□□ -1.91
Scn9aQ62205 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.09□□□□□ -1.92
Scn9aQ62205 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Scn9aQ62205 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.09□□□□□ -1.92
Scn9aQ62205 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.09□□□□□ -1.92
Scn9aQ62205 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC3.09□□□□□ -1.92
Scn9aQ62205 Gm15936-201ENSMUST00000118706 460 ntBASIC3.09□□□□□ -1.92
Scn9aQ62205 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Scn9aQ62205 Gm6373-201ENSMUST00000121026 360 ntBASIC3.09□□□□□ -1.92
Scn9aQ62205 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC3.09□□□□□ -1.92
Scn9aQ62205 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC3.09□□□□□ -1.92
Scn9aQ62205 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.09□□□□□ -1.92
Scn9aQ62205 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.09□□□□□ -1.92
Scn9aQ62205 AC159263.3-201ENSMUST00000223434 460 ntBASIC3.09□□□□□ -1.92
Scn9aQ62205 CT009713.4-201ENSMUST00000224246 272 ntBASIC3.09□□□□□ -1.92
Scn9aQ62205 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Scn9aQ62205 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Scn9aQ62205 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.08□□□□□ -1.92
Scn9aQ62205 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Scn9aQ62205 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Scn9aQ62205 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.08□□□□□ -1.92
Scn9aQ62205 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Scn9aQ62205 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Scn9aQ62205 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Scn9aQ62205 Gm23766-201ENSMUST00000103894 80 ntBASIC3.08□□□□□ -1.92
Scn9aQ62205 Gm19200-201ENSMUST00000182579 1001 ntBASIC3.08□□□□□ -1.92
Scn9aQ62205 Gm27636-201ENSMUST00000184528 122 ntBASIC3.08□□□□□ -1.92
Scn9aQ62205 Gm19224-201ENSMUST00000190477 793 ntBASIC3.08□□□□□ -1.92
Scn9aQ62205 Gm38283-201ENSMUST00000193041 695 ntBASIC3.08□□□□□ -1.92
Scn9aQ62205 Gm42828-201ENSMUST00000199669 469 ntBASIC3.08□□□□□ -1.92
Scn9aQ62205 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Scn9aQ62205 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Scn9aQ62205 Gm23264-201ENSMUST00000083372 107 ntBASIC3.08□□□□□ -1.92
Scn9aQ62205 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Scn9aQ62205 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Scn9aQ62205 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.08□□□□□ -1.92
Scn9aQ62205 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Scn9aQ62205 Gm24671-201ENSMUST00000104159 158 ntBASIC3.07□□□□□ -1.92
Scn9aQ62205 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 139.2 ms