Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm4852-201ENSMUST00000121202 729 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm11982-201ENSMUST00000121480 314 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm23886-201ENSMUST00000122684 313 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm23023-201ENSMUST00000158767 109 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm22395-201ENSMUST00000177427 96 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm23287-201ENSMUST00000179427 116 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm22307-201ENSMUST00000180019 107 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm23143-201ENSMUST00000180137 116 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm29597-201ENSMUST00000188035 308 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm37288-201ENSMUST00000193963 334 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm45146-201ENSMUST00000207108 221 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm18268-201ENSMUST00000208445 943 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 AC153971.2-201ENSMUST00000214553 777 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm5655-201ENSMUST00000221078 901 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 AC154305.1-201ENSMUST00000224443 450 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 AC124581.4-201ENSMUST00000225874 463 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 AC125539.1-202ENSMUST00000226449 670 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 AC137871.2-201ENSMUST00000226482 289 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm22507-201ENSMUST00000082773 160 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm24871-201ENSMUST00000083099 116 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav3-3Q5R1C3 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 AC159188.2-201ENSMUST00000224103 1301 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Mir551b-201ENSMUST00000102165 98 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm14125-201ENSMUST00000113442 680 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm22194-201ENSMUST00000116869 95 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm13567-201ENSMUST00000118026 247 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm14554-201ENSMUST00000119548 661 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm11704-201ENSMUST00000120031 214 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm14463-201ENSMUST00000121117 498 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm8840-201ENSMUST00000122454 386 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm25107-201ENSMUST00000122472 129 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm13901-201ENSMUST00000137252 468 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm10357-201ENSMUST00000159886 264 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm8338-201ENSMUST00000163928 363 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm5967-201ENSMUST00000172723 494 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Mir1251-201ENSMUST00000175486 84 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm21241-201ENSMUST00000179551 934 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm27611-201ENSMUST00000184690 108 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm20819-201ENSMUST00000191091 925 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm20871-201ENSMUST00000191322 931 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm37979-201ENSMUST00000193065 712 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm9023-201ENSMUST00000198408 1038 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm43659-201ENSMUST00000200894 628 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm43039-201ENSMUST00000202883 963 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm19126-201ENSMUST00000207896 509 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 CT009765.2-201ENSMUST00000221331 392 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 AC126275.2-201ENSMUST00000225224 253 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Vmn1r89-206ENSMUST00000227319 985 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Snord22-201ENSMUST00000083153 126 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Gm4017-201ENSMUST00000084813 338 ntBASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.48□□□□□ -2.01
Trav3-3Q5R1C3 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms