Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm28500-201ENSMUST00000190286 151 ntBASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm32175-201ENSMUST00000193641 346 ntBASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Igkv12-49-201ENSMUST00000197714 278 ntBASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm42828-201ENSMUST00000199669 469 ntBASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm45259-201ENSMUST00000209217 1006 ntBASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 AC192333.5-201ENSMUST00000224620 2350 ntBASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Ccdc88bQ4QRL3 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Mir92-1-201ENSMUST00000102108 80 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Gm7753-201ENSMUST00000221007 867 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Gm24671-201ENSMUST00000104159 158 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Gm24436-201ENSMUST00000157889 302 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Gm17194-201ENSMUST00000164610 348 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Gm3852-201ENSMUST00000182781 264 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Gm27399-201ENSMUST00000184250 78 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Gm45246-201ENSMUST00000210820 367 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 AC134596.2-201ENSMUST00000222158 171 ntBASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ccdc88bQ4QRL3 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Gm14848-201ENSMUST00000121850 467 ntBASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Snord53-201ENSMUST00000175146 78 ntBASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Gm29356-201ENSMUST00000186935 373 ntBASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Mir6925-201ENSMUST00000197857 70 ntBASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Gm44490-201ENSMUST00000198566 127 ntBASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Igkv4-60-201ENSMUST00000200639 358 ntBASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Gm46389-201ENSMUST00000223199 392 ntBASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.17□□□□□ -1.74
Ccdc88bQ4QRL3 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ccdc88bQ4QRL3 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.16□□□□□ -1.74
Ccdc88bQ4QRL3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ccdc88bQ4QRL3 Gm15019-201ENSMUST00000120148 434 ntBASIC4.16□□□□□ -1.74
Ccdc88bQ4QRL3 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC4.16□□□□□ -1.74
Ccdc88bQ4QRL3 Mir6363-201ENSMUST00000184880 114 ntBASIC4.16□□□□□ -1.74
Ccdc88bQ4QRL3 Mir322-201ENSMUST00000083484 95 ntBASIC4.16□□□□□ -1.74
Ccdc88bQ4QRL3 AC122850.1-201ENSMUST00000220380 5690 ntBASIC4.15□□□□□ -1.74
Ccdc88bQ4QRL3 Gm13756-201ENSMUST00000117618 222 ntBASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Gm11877-201ENSMUST00000118921 852 ntBASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Gm26277-201ENSMUST00000157097 152 ntBASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Gm17030-201ENSMUST00000167016 393 ntBASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Gm28923-201ENSMUST00000187755 322 ntBASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 AC154600.1-201ENSMUST00000226480 714 ntBASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Gm43780-201ENSMUST00000196510 3600 ntBASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc88bQ4QRL3 Gm24890-201ENSMUST00000104389 102 ntBASIC4.14□□□□□ -1.75
Ccdc88bQ4QRL3 Gm12443-201ENSMUST00000122308 323 ntBASIC4.14□□□□□ -1.75
Ccdc88bQ4QRL3 Gm26993-201ENSMUST00000182766 789 ntBASIC4.14□□□□□ -1.75
Ccdc88bQ4QRL3 Gm44477-201ENSMUST00000199661 110 ntBASIC4.14□□□□□ -1.75
Ccdc88bQ4QRL3 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc88bQ4QRL3 Gm45382-201ENSMUST00000210607 151 ntBASIC4.14□□□□□ -1.75
Ccdc88bQ4QRL3 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC4.14□□□□□ -1.75
Ccdc88bQ4QRL3 Gm5374-201ENSMUST00000222868 657 ntBASIC4.14□□□□□ -1.75
Ccdc88bQ4QRL3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC4.14□□□□□ -1.75
Ccdc88bQ4QRL3 AC167192.3-201ENSMUST00000224096 1567 ntBASIC4.14□□□□□ -1.75
Ccdc88bQ4QRL3 Mir344e-201ENSMUST00000104677 66 ntBASIC4.13□□□□□ -1.75
Ccdc88bQ4QRL3 Gm13862-201ENSMUST00000121220 197 ntBASIC4.13□□□□□ -1.75
Ccdc88bQ4QRL3 Mir7225-201ENSMUST00000184178 54 ntBASIC4.13□□□□□ -1.75
Ccdc88bQ4QRL3 Gm28466-201ENSMUST00000190678 659 ntBASIC4.13□□□□□ -1.75
Ccdc88bQ4QRL3 Mir3087-201ENSMUST00000199405 56 ntBASIC4.13□□□□□ -1.75
Ccdc88bQ4QRL3 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc88bQ4QRL3 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc88bQ4QRL3 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc88bQ4QRL3 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.13□□□□□ -1.75
Ccdc88bQ4QRL3 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc88bQ4QRL3 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Gm26411-201ENSMUST00000157668 107 ntBASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Gm24532-201ENSMUST00000157951 286 ntBASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Trbv10-201ENSMUST00000168322 289 ntBASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Gm23289-201ENSMUST00000175615 108 ntBASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Gm25130-201ENSMUST00000082650 156 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms