Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm23939-201ENSMUST00000082880 133 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm44742-201ENSMUST00000207190 1412 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.32□□□□□ -1.88
Trim40Q3UWA4 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim40Q3UWA4 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Mir551b-201ENSMUST00000102165 98 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm12125-201ENSMUST00000117261 736 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm14299-201ENSMUST00000117586 397 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm12607-201ENSMUST00000120724 493 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm14651-201ENSMUST00000147192 442 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm24244-201ENSMUST00000157317 130 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm22889-201ENSMUST00000158639 58 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm25198-201ENSMUST00000178574 110 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm27861-201ENSMUST00000183920 214 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm29288-201ENSMUST00000191582 901 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm43384-201ENSMUST00000200569 637 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm44294-201ENSMUST00000205090 728 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm45146-201ENSMUST00000207108 221 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm7786-201ENSMUST00000210494 436 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm45814-201ENSMUST00000212646 775 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm5548-201ENSMUST00000055878 397 ntBASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim40Q3UWA4 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Mir291a-201ENSMUST00000104815 82 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm22709-201ENSMUST00000116893 111 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm15195-201ENSMUST00000118775 263 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm14901-201ENSMUST00000119001 283 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm14282-201ENSMUST00000119484 240 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm13973-201ENSMUST00000121371 894 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm11982-201ENSMUST00000121480 314 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm15263-201ENSMUST00000121556 642 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm15529-201ENSMUST00000121833 994 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm22501-201ENSMUST00000158981 127 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Mir1251-201ENSMUST00000175486 84 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm18416-201ENSMUST00000175635 1003 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm29259-201ENSMUST00000186396 694 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm28847-201ENSMUST00000186778 700 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm29365-201ENSMUST00000189461 699 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm37828-201ENSMUST00000192496 432 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm37698-201ENSMUST00000192605 463 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm43096-201ENSMUST00000196173 421 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm9379-201ENSMUST00000196790 646 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm43239-201ENSMUST00000200131 201 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm44282-201ENSMUST00000203199 190 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm45778-201ENSMUST00000211959 153 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 LOC667541-201ENSMUST00000223408 278 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim40Q3UWA4 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms