Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Mir1193-201ENSMUST00000116761 121 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Gm24831-201ENSMUST00000116778 126 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Gm11708-201ENSMUST00000119530 832 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Gm22516-201ENSMUST00000158266 124 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Gm23505-201ENSMUST00000158989 130 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Atp2b4-208ENSMUST00000167348 243 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Gm42516-201ENSMUST00000198691 767 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Gm45247-201ENSMUST00000210757 309 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.21□□□□□ -1.9
Upf3bQ3ULL6 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Mir804-201ENSMUST00000103251 95 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm25308-201ENSMUST00000104171 158 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm22023-201ENSMUST00000104354 130 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm14971-201ENSMUST00000117980 663 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm23167-201ENSMUST00000157155 103 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm24138-201ENSMUST00000157572 114 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm25555-201ENSMUST00000158078 111 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm23583-201ENSMUST00000158533 289 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm24734-201ENSMUST00000158860 262 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm26928-201ENSMUST00000182674 572 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
Upf3bQ3ULL6 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm22939-201ENSMUST00000103958 131 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm14901-201ENSMUST00000119001 283 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm16100-201ENSMUST00000120489 231 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm14101-201ENSMUST00000121502 473 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm11229-201ENSMUST00000121993 437 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm14253-201ENSMUST00000122112 639 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm16363-201ENSMUST00000132460 877 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm22961-201ENSMUST00000157964 106 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Mir7047-201ENSMUST00000184595 64 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm28534-201ENSMUST00000187744 676 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm7897-201ENSMUST00000193981 554 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm42796-201ENSMUST00000199913 1087 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm46233-201ENSMUST00000217831 449 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Upf3bQ3ULL6 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm13504-201ENSMUST00000117490 316 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm23183-201ENSMUST00000122595 323 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm26000-201ENSMUST00000157991 107 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm15974-201ENSMUST00000159103 531 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm3470-201ENSMUST00000160819 420 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm18520-201ENSMUST00000174783 658 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Mir7578-201ENSMUST00000183455 82 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm7142-201ENSMUST00000194232 586 ntBASIC3.18□□□□□ -1.9
Upf3bQ3ULL6 Gm19080-201ENSMUST00000196082 550 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms