Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm43975-201ENSMUST00000203023 481 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm45063-201ENSMUST00000203726 472 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 AL603630.1-201ENSMUST00000214781 147 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm23516-201ENSMUST00000093728 107 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Olfr713-201ENSMUST00000098139 975 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Gm37195-201ENSMUST00000192006 3018 ntBASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Ssbp4Q3U4B1 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Mir690-201ENSMUST00000102110 109 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm25833-201ENSMUST00000104137 133 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm26387-201ENSMUST00000104238 132 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm25876-201ENSMUST00000104329 119 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm11843-201ENSMUST00000118984 425 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm12755-201ENSMUST00000122297 282 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm24289-201ENSMUST00000157629 135 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm24666-201ENSMUST00000158937 167 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm22501-201ENSMUST00000158981 127 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm18588-201ENSMUST00000177308 492 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm14527-201ENSMUST00000179300 639 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm6501-201ENSMUST00000187178 916 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm29600-201ENSMUST00000188687 377 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm42622-201ENSMUST00000197229 355 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm5983-201ENSMUST00000197739 770 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm43405-201ENSMUST00000198642 337 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm44099-201ENSMUST00000203299 112 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm8745-201ENSMUST00000207846 782 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm22829-201ENSMUST00000083771 106 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ssbp4Q3U4B1 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm14751-201ENSMUST00000117693 222 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm14293-201ENSMUST00000118528 577 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm15266-201ENSMUST00000119635 255 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm12335-201ENSMUST00000119738 327 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm11718-201ENSMUST00000119942 537 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm22480-201ENSMUST00000122568 128 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm24505-201ENSMUST00000157682 126 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm23198-201ENSMUST00000158811 91 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm9593-201ENSMUST00000166034 469 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Gm20673-201ENSMUST00000177167 430 ntBASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ssbp4Q3U4B1 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms