Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm14816-201ENSMUST00000117174 294 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm11352-201ENSMUST00000119264 517 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm6584-201ENSMUST00000119671 447 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm13627-201ENSMUST00000119700 706 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm16327-201ENSMUST00000137146 228 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm25058-201ENSMUST00000157365 128 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm25386-201ENSMUST00000157814 288 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm22501-201ENSMUST00000158981 127 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm25874-201ENSMUST00000178030 79 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm26335-201ENSMUST00000178449 107 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm28920-201ENSMUST00000189957 699 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm29389-201ENSMUST00000191562 352 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm37523-201ENSMUST00000194901 412 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm43710-201ENSMUST00000199583 452 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm44521-201ENSMUST00000206469 217 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm45409-201ENSMUST00000211486 252 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col28a1Q2UY11 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Mir551b-201ENSMUST00000102165 98 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm26367-201ENSMUST00000104165 132 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm25420-201ENSMUST00000104216 127 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Mir467g-201ENSMUST00000116906 120 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm11325-201ENSMUST00000119967 469 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm16331-201ENSMUST00000144274 498 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm25909-201ENSMUST00000157619 121 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm24853-201ENSMUST00000158026 121 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm25163-201ENSMUST00000158905 104 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm28579-201ENSMUST00000186143 369 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm17929-201ENSMUST00000186851 627 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm10193-201ENSMUST00000188288 231 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm29552-201ENSMUST00000190548 660 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm30280-201ENSMUST00000192214 262 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm37111-201ENSMUST00000193250 634 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm37300-201ENSMUST00000193327 280 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm9227-201ENSMUST00000194733 566 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm43649-201ENSMUST00000196596 391 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm17887-201ENSMUST00000200194 547 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm4045-201ENSMUST00000204076 310 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm45735-201ENSMUST00000212779 319 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 AC104832.1-201ENSMUST00000222938 550 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm26165-201ENSMUST00000083791 138 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm37268-201ENSMUST00000192254 2614 ntBASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col28a1Q2UY11 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms