Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm45131-201ENSMUST00000208051 2582 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm12016-201ENSMUST00000119079 681 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm7916-201ENSMUST00000120325 456 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm14574-201ENSMUST00000120644 279 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm15142-201ENSMUST00000121013 856 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm11363-201ENSMUST00000121672 548 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Mup-ps4-201ENSMUST00000151005 539 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm7094-201ENSMUST00000178379 366 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm27160-201ENSMUST00000184837 199 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm27919-201ENSMUST00000185163 107 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm29552-201ENSMUST00000190548 660 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm18291-201ENSMUST00000190791 301 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm43493-201ENSMUST00000199837 202 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm17906-201ENSMUST00000202480 901 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm45508-201ENSMUST00000209298 299 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm45252-201ENSMUST00000211579 397 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.92□□□□□ -1.46
Col17a1Q07563 CT009713.9-201ENSMUST00000223604 389 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm25739-201ENSMUST00000082886 107 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Col17a1Q07563 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col17a1Q07563 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col17a1Q07563 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col17a1Q07563 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.92□□□□□ -1.46
Col17a1Q07563 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Col17a1Q07563 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.92□□□□□ -1.46
Col17a1Q07563 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col17a1Q07563 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col17a1Q07563 AC153881.3-201ENSMUST00000218494 1561 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm12760-201ENSMUST00000117861 482 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm15553-201ENSMUST00000118757 430 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm24936-201ENSMUST00000122598 247 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm22322-201ENSMUST00000157151 111 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm22551-201ENSMUST00000157795 103 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm25839-201ENSMUST00000158921 103 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm17117-201ENSMUST00000163665 299 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm2855-201ENSMUST00000166765 456 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm27903-201ENSMUST00000175482 126 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm21737-201ENSMUST00000178112 664 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm20874-201ENSMUST00000178356 663 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm21744-201ENSMUST00000178403 662 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm20901-201ENSMUST00000180177 664 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Mir6341-201ENSMUST00000183490 121 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm28090-201ENSMUST00000189458 664 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm21647-201ENSMUST00000189755 664 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm37353-201ENSMUST00000194497 313 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.91□□□□□ -1.46
Col17a1Q07563 AC153975.1-201ENSMUST00000220087 926 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 AC160999.1-201ENSMUST00000225675 810 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm10916-201ENSMUST00000080330 483 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm23302-201ENSMUST00000082710 100 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col17a1Q07563 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col17a1Q07563 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col17a1Q07563 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Col17a1Q07563 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col17a1Q07563 Gm38073-201ENSMUST00000195141 3665 ntBASIC5.91□□□□□ -1.46
Col17a1Q07563 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col17a1Q07563 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col17a1Q07563 Gm22091-201ENSMUST00000116908 127 ntBASIC5.9□□□□□ -1.46
Col17a1Q07563 Gm16383-201ENSMUST00000118122 232 ntBASIC5.9□□□□□ -1.46
Col17a1Q07563 Gm14852-201ENSMUST00000120065 647 ntBASIC5.9□□□□□ -1.46
Col17a1Q07563 Gm13743-201ENSMUST00000121486 724 ntBASIC5.9□□□□□ -1.46
Col17a1Q07563 Gm22336-201ENSMUST00000157719 107 ntBASIC5.9□□□□□ -1.46
Col17a1Q07563 Gm27374-201ENSMUST00000183660 81 ntBASIC5.9□□□□□ -1.46
Col17a1Q07563 Gm27803-201ENSMUST00000183763 119 ntBASIC5.9□□□□□ -1.46
Col17a1Q07563 Gm28956-201ENSMUST00000189047 427 ntBASIC5.9□□□□□ -1.46
Col17a1Q07563 Gm29818-201ENSMUST00000218070 165 ntBASIC5.9□□□□□ -1.46
Col17a1Q07563 AC132384.9-201ENSMUST00000218085 277 ntBASIC5.9□□□□□ -1.46
Col17a1Q07563 CT030704.1-201ENSMUST00000227521 699 ntBASIC5.9□□□□□ -1.46
Col17a1Q07563 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col17a1Q07563 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col17a1Q07563 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col17a1Q07563 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col17a1Q07563 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col17a1Q07563 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col17a1Q07563 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Col17a1Q07563 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col17a1Q07563 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col17a1Q07563 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC5.9□□□□□ -1.47
Col17a1Q07563 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.9□□□□□ -1.47
Col17a1Q07563 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Col17a1Q07563 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.9□□□□□ -1.47
Col17a1Q07563 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Col17a1Q07563 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Col17a1Q07563 Gm23011-201ENSMUST00000104148 132 ntBASIC5.9□□□□□ -1.47
Col17a1Q07563 Gm13761-201ENSMUST00000117238 807 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 143.5 ms