Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm25592-201ENSMUST00000082635 131 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm26054-201ENSMUST00000083037 107 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm24492-201ENSMUST00000083798 107 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col9a1Q05722 AC125223.3-201ENSMUST00000223588 2067 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm37006-201ENSMUST00000195253 2674 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col9a1Q05722 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.74□□□□□ -1.49
Col9a1Q05722 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.74□□□□□ -1.49
Col9a1Q05722 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col9a1Q05722 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm23319-201ENSMUST00000104467 131 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm15926-201ENSMUST00000120492 550 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm27855-201ENSMUST00000184122 128 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm28627-201ENSMUST00000186141 453 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Ighv15-1-201ENSMUST00000194450 276 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm37167-201ENSMUST00000194946 396 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Mir376a-201ENSMUST00000197584 68 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm44316-201ENSMUST00000199274 97 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm43309-201ENSMUST00000200837 458 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Col9a1Q05722 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Col9a1Q05722 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm42885-201ENSMUST00000200763 4214 ntBASIC5.73□□□□□ -1.49
Col9a1Q05722 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
Col9a1Q05722 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Col9a1Q05722 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm28634-201ENSMUST00000191087 2613 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Col9a1Q05722 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm34294-201ENSMUST00000191912 4263 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm22758-201ENSMUST00000102275 96 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm14842-201ENSMUST00000119577 269 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm25985-201ENSMUST00000122677 107 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm5963-201ENSMUST00000143451 236 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm22792-201ENSMUST00000157225 133 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm22395-201ENSMUST00000177427 96 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm25457-201ENSMUST00000179509 107 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm29429-201ENSMUST00000187071 121 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm44494-201ENSMUST00000196760 129 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm6051-201ENSMUST00000201529 352 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm44208-201ENSMUST00000205199 421 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Gm45907-201ENSMUST00000213023 193 ntBASIC5.72□□□□□ -1.49
Col9a1Q05722 Snora2b-201ENSMUST00000084005 137 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms