Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Col6a1Q04857 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a1Q04857 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a1Q04857 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.29□□□□□ -1.56
Col6a1Q04857 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a1Q04857 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a1Q04857 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm15267-201ENSMUST00000120888 464 ntBASIC5.29□□□□□ -1.56
Col6a1Q04857 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm22290-201ENSMUST00000177655 107 ntBASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm22583-201ENSMUST00000178031 107 ntBASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm27805-201ENSMUST00000184513 79 ntBASIC5.29□□□□□ -1.56
Col6a1Q04857 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm9443-201ENSMUST00000188406 816 ntBASIC5.29□□□□□ -1.56
Col6a1Q04857 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm38098-201ENSMUST00000194115 241 ntBASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.29□□□□□ -1.56
Col6a1Q04857 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm26447-201ENSMUST00000082448 129 ntBASIC5.29□□□□□ -1.56
Col6a1Q04857 Gm23447-201ENSMUST00000082798 163 ntBASIC5.29□□□□□ -1.56
Col6a1Q04857 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a1Q04857 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Col6a1Q04857 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a1Q04857 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm11403-201ENSMUST00000122195 369 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm22637-201ENSMUST00000158144 283 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm23581-201ENSMUST00000158531 63 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm8807-201ENSMUST00000179328 492 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm38044-201ENSMUST00000192964 487 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Igkv2-105-201ENSMUST00000196931 377 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm19418-201ENSMUST00000197436 580 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm44083-201ENSMUST00000203114 337 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm5955-201ENSMUST00000222712 219 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm7093-201ENSMUST00000223004 581 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm26228-201ENSMUST00000082512 107 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm25080-201ENSMUST00000082526 107 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm25592-201ENSMUST00000082635 131 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm25008-201ENSMUST00000083809 81 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm25518-201ENSMUST00000083864 107 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a1Q04857 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a1Q04857 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.28□□□□□ -1.56
Col6a1Q04857 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Col6a1Q04857 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.27□□□□□ -1.57
Col6a1Q04857 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a1Q04857 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a1Q04857 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a1Q04857 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm22473-201ENSMUST00000104114 132 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a1Q04857 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm14359-201ENSMUST00000118883 424 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm11388-201ENSMUST00000120908 159 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm23213-201ENSMUST00000122715 313 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.27□□□□□ -1.57
Col6a1Q04857 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm23169-201ENSMUST00000157157 112 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm23964-201ENSMUST00000157966 107 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm17153-201ENSMUST00000171314 490 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm20428-201ENSMUST00000174365 283 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Gm25748-201ENSMUST00000175487 70 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 Mir5710-201ENSMUST00000176884 69 ntBASIC5.27□□□□□ -1.57
Col6a1Q04857 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms