Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm14389-201ENSMUST00000140453 241 ntBASIC3.78□□□□□ -1.8
NcanP55066 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.78□□□□□ -1.8
NcanP55066 Gm25413-201ENSMUST00000158544 312 ntBASIC3.78□□□□□ -1.8
NcanP55066 Gm18358-201ENSMUST00000173179 1277 ntBASIC3.78□□□□□ -1.8
NcanP55066 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NcanP55066 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.78□□□□□ -1.8
NcanP55066 Gm42621-201ENSMUST00000198114 275 ntBASIC3.78□□□□□ -1.8
NcanP55066 Gm18748-201ENSMUST00000198507 622 ntBASIC3.78□□□□□ -1.8
NcanP55066 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.78□□□□□ -1.8
NcanP55066 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.78□□□□□ -1.8
NcanP55066 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NcanP55066 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.78□□□□□ -1.8
NcanP55066 Gm4528-201ENSMUST00000207905 551 ntBASIC3.78□□□□□ -1.8
NcanP55066 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.78□□□□□ -1.8
NcanP55066 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC3.78□□□□□ -1.8
NcanP55066 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.78□□□□□ -1.8
NcanP55066 Gm18617-201ENSMUST00000222311 259 ntBASIC3.78□□□□□ -1.8
NcanP55066 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.78□□□□□ -1.8
NcanP55066 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.78□□□□□ -1.8
NcanP55066 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.78□□□□□ -1.8
NcanP55066 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.78□□□□□ -1.8
NcanP55066 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NcanP55066 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NcanP55066 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NcanP55066 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NcanP55066 Gm24254-201ENSMUST00000083702 104 ntBASIC3.78□□□□□ -1.8
NcanP55066 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.78□□□□□ -1.8
NcanP55066 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NcanP55066 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NcanP55066 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.78□□□□□ -1.8
NcanP55066 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NcanP55066 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.78□□□□□ -1.8
NcanP55066 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NcanP55066 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NcanP55066 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
NcanP55066 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.77□□□□□ -1.81
NcanP55066 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NcanP55066 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NcanP55066 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NcanP55066 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
NcanP55066 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
NcanP55066 Gm14932-201ENSMUST00000117112 453 ntBASIC3.77□□□□□ -1.81
NcanP55066 Gm12722-201ENSMUST00000118507 493 ntBASIC3.77□□□□□ -1.81
NcanP55066 Gm11835-201ENSMUST00000120635 663 ntBASIC3.77□□□□□ -1.81
NcanP55066 Gm22345-201ENSMUST00000122644 107 ntBASIC3.77□□□□□ -1.81
NcanP55066 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NcanP55066 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.77□□□□□ -1.81
NcanP55066 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.77□□□□□ -1.81
NcanP55066 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NcanP55066 Gm26100-201ENSMUST00000157245 127 ntBASIC3.77□□□□□ -1.81
NcanP55066 Gm8161-201ENSMUST00000168739 481 ntBASIC3.77□□□□□ -1.81
NcanP55066 Gm9890-201ENSMUST00000171867 537 ntBASIC3.77□□□□□ -1.81
NcanP55066 Gm27783-201ENSMUST00000183534 105 ntBASIC3.77□□□□□ -1.81
NcanP55066 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NcanP55066 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NcanP55066 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.77□□□□□ -1.81
NcanP55066 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.77□□□□□ -1.81
NcanP55066 Gm42578-201ENSMUST00000199960 194 ntBASIC3.77□□□□□ -1.81
NcanP55066 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NcanP55066 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NcanP55066 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.77□□□□□ -1.81
NcanP55066 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.77□□□□□ -1.81
NcanP55066 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NcanP55066 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NcanP55066 Gm25636-201ENSMUST00000082666 133 ntBASIC3.77□□□□□ -1.81
NcanP55066 Gm23448-201ENSMUST00000083151 104 ntBASIC3.77□□□□□ -1.81
NcanP55066 Gm22578-201ENSMUST00000083730 107 ntBASIC3.77□□□□□ -1.81
NcanP55066 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NcanP55066 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NcanP55066 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NcanP55066 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
NcanP55066 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NcanP55066 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
NcanP55066 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.76□□□□□ -1.81
NcanP55066 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NcanP55066 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NcanP55066 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NcanP55066 Gm22149-201ENSMUST00000104442 136 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm12025-201ENSMUST00000117768 144 ntBASIC3.76□□□□□ -1.81
NcanP55066 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm13687-201ENSMUST00000119857 282 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm25979-201ENSMUST00000157177 138 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm23585-201ENSMUST00000157656 102 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm24768-201ENSMUST00000158512 94 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm23385-201ENSMUST00000158592 295 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm4468-201ENSMUST00000170206 294 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.76□□□□□ -1.81
NcanP55066 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.76□□□□□ -1.81
NcanP55066 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.76□□□□□ -1.81
NcanP55066 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.76□□□□□ -1.81
NcanP55066 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NcanP55066 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms