Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm23256-201ENSMUST00000102235 110 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm26140-201ENSMUST00000103807 110 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm11260-201ENSMUST00000121163 942 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm25177-201ENSMUST00000122634 117 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm22453-201ENSMUST00000122801 318 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm23123-201ENSMUST00000157648 144 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm24727-201ENSMUST00000158231 144 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm23198-201ENSMUST00000158811 91 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm17183-201ENSMUST00000171170 493 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm22908-201ENSMUST00000177620 110 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Mir6996-201ENSMUST00000183922 61 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm7041-201ENSMUST00000201227 524 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm6240-201ENSMUST00000208014 473 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm2544-201ENSMUST00000222702 756 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 AC132112.1-201ENSMUST00000226354 505 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm24623-201ENSMUST00000082616 194 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Mir383-201ENSMUST00000083523 70 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Mir34b-201ENSMUST00000083558 84 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nkx2-1P50220 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.18□□□□□ -1.9
Nkx2-1P50220 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx2-1P50220 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Snora64-201ENSMUST00000104521 134 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Mir669d-2-201ENSMUST00000116854 86 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm14007-201ENSMUST00000118288 210 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm13314-201ENSMUST00000118742 335 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm14037-201ENSMUST00000120576 313 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm12607-201ENSMUST00000120724 493 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm4916-201ENSMUST00000126139 642 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm24393-201ENSMUST00000158135 97 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm24976-201ENSMUST00000158972 135 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm18588-201ENSMUST00000177308 492 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm21894-201ENSMUST00000179631 546 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Mir6537-201ENSMUST00000184150 110 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Mir6391-201ENSMUST00000184391 104 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm2950-201ENSMUST00000185530 520 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm19498-201ENSMUST00000191128 331 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm38075-201ENSMUST00000191979 920 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm37288-201ENSMUST00000193963 334 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm9309-201ENSMUST00000223537 546 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm24150-201ENSMUST00000082759 104 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.17□□□□□ -1.9
Nkx2-1P50220 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Nkx2-1P50220 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm23319-201ENSMUST00000104467 131 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Mir466n-201ENSMUST00000104798 94 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm25773-201ENSMUST00000116718 127 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm14751-201ENSMUST00000117693 222 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm15443-201ENSMUST00000118947 820 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm6587-201ENSMUST00000120219 613 ntBASIC3.16□□□□□ -1.9
Nkx2-1P50220 Gm12543-201ENSMUST00000120410 543 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms